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BaseInfo

ncRNA ID novel_gma_miR8356
Species Glycine max
Class miRNA
Genome position Chr1:6361651-6361703 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618;SRR1451621
Length 22
Mature sequence(if miRNA) 32 - UCCGGAAGAAGAAUUUGUGACU - 53
Stem-loop(if miRNA) --        A  AA      ---    C
  UCCGGAAG AG  UUUGUG   ACUU C
  |||||||| ||  ||||||   ||||
  AGGCCUUC UC  AAACAC   UGAA A
GA        A  --      CCA    G
Stem-loop sequence UCCGGAAGAAGAAUUUGUGACUUCCAGAAGUACCCACAAACUACUUCCGGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098485.1
ncRNA:22   UCAGUGUUUAAGAAGAAGGCCU   1
  ***||||||||||||||||*||
targets:392   CUGCACAAAUUCUUCUUCCAGA   413

1.5 Soybean clone JCVI-FLGm-12D21 unknown mRNA NA coding protein psRNATarget
XM_006573284.2
ncRNA:22   UCAGUGUUUAAGAAGAAGGCCU   1
  **|||=*|||||||||||||||
targets:1651   CUUCAUCAAUUCUUCUUCCGGA   1672

2.0 PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA aquaporin PIP1-2-like(LOC100781984) coding protein psRNATarget
XM_006602964.2
ncRNA:22   UCAGUGU-UUAAGAAGAAGGCCU   1
  ***||||-=||||||||||||||
targets:1537   CAACACAUGAUUCUUCUUCCGGA   1559

3.0 PREDICTED: Glycine max disease resistance protein RPP13-like (LOC100780593), mRNA disease resistance protein RPP13-like(LOC100780593) coding protein psRNATarget