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BaseInfo

ncRNA ID ath-miR849
Species Arabidopsis thaliana
Class miRNA
Genome position chr3:16072449-16072637 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 52 - UAACUAAACAUUGGUGUAGUA - 72
Stem-loop(if miRNA) UAAUUUGGUUAAA    UU  - CAUUUUUUAUUUAUUUAUGAUUGGACAACUACUAGACCAAUGUUUAGUUAGUACAUCCAAUGUUAUAAGUACAAAAUA
             UGUU  CA A                                                                              A
             ||||  || |
             UUAA  UU G                                                                              U
------------G    --  U GUCCCUAGUUAGAAGAGCGAGGGUUGUUAUCUCAGCCUGUUGAUGAUGUGGUUACAAAUCAAUCAUCUAGGUUGUGUA
Stem-loop sequence UAAUUUGGUUAAAUGUUUUCAACAUUUUUUAUUUAUUUAUGAUUGGACAACUACUAGACCAAUGUUUAGUUAGUACAUCCAAUGUUAUAAGUACAAAAUAAUAUGUGUUGGAUCUACUAACUAAACAUUGGUGUAGUAGUUGUCCGACUCUAUUGUUGGGAGCGAGAAGAUUGAUCCCUGGUUUAAUUG

Reference

1 PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana";
Rajagopalan R, Vaucheret H, Trejo J, Bartel DP;
Genes Dev. 20:3407-3425(2006).