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BaseInfo

ncRNA ID novel_gma_miR8343
Species Glycine max
Class miRNA
Genome position Chr14:45571417-45571547 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 24
Mature sequence(if miRNA) 1 - AAAUUCACUAAUUUGUCAAGGACU - 24
Stem-loop(if miRNA) --              UC                   C     AUUAGCGAAU      -     C
  UCCUUGAUAAAUUA  GAAUUUUGUGUUUGCUCCC AAUAA          UUUGUU UUAGU C
  ||||||||||||||  ||||||||||||||||||| |||||          |||||| |||||
  AGGAACUGUUUAAU  CUUAAAACACAAACGAGGG UUAUU          AAACAA GGUUA C
UC              CA                   C     AAAAAAAAGU      U     G
Stem-loop sequence UCCUUGAUAAAUUAUCGAAUUUUGUGUUUGCUCCCCAAUAAAUUAGCGAAUUUUGUUUUAGUCCCGAUUGGUAACAAAUGAAAAAAAAUUAUUCGGGAGCAAACACAAAAUUCACUAAUUUGUCAAGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003537525.3
ncRNA:24   UCA--GGAAC-UGUUUAAUCACUUAAA   1
  |||--==|*|-||||||||||||||||
targets:2346   AGUAAUUUAGUACAAAUUAGUGAAUUU   2372

3.0 PREDICTED: Glycine max vicilin-like antimicrobial peptides 2-2 (LOC100813415), mRNA vicilin-like antimicrobial peptides 2-2(LOC100813415) coding protein psRNATarget