ncRNA ID | novel_gma_miR8343 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:45571417-45571547 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUUCACUAAUUUGUCAAGGACU - 24 |
Stem-loop(if miRNA) |
--              UC                   C     AUUAGCGAAU      -     C   UCCUUGAUAAAUUA  GAAUUUUGUGUUUGCUCCC AAUAA          UUUGUU UUAGU C   ||||||||||||||  ||||||||||||||||||| |||||          |||||| |||||   AGGAACUGUUUAAU  CUUAAAACACAAACGAGGG UUAUU          AAACAA GGUUA C UC              CA                   C     AAAAAAAAGU      U     G |
Stem-loop sequence | UCCUUGAUAAAUUAUCGAAUUUUGUGUUUGCUCCCCAAUAAAUUAGCGAAUUUUGUUUUAGUCCCGAUUGGUAACAAAUGAAAAAAAAUUAUUCGGGAGCAAACACAAAAUUCACUAAUUUGUCAAGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003537525.3 |
|
3.0 | PREDICTED: Glycine max vicilin-like antimicrobial peptides 2-2 (LOC100813415), mRNA | vicilin-like antimicrobial peptides 2-2(LOC100813415) | coding protein | psRNATarget |