Search result

BaseInfo

ncRNA ID	novel_gma_miR8331
Species	Glycine max
Class	miRNA
Genome position	Chr13:40084105-40084177 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451618
Length	24
Mature sequence(if miRNA)	1 - CAAAUUGUUCAUCUGGAAGAACCU - 24
Stem-loop(if miRNA)	--   A      -   UG                 UAA   CAA UUGUUC AUC  GAAGAACCUUCUUCCAG   C   ||| |||||| |||  |||||||||||||||||   GUU AACAAG UGG  CUUCUUGGAAGAAGGUU   U CU   A      A   --                 UCU
Stem-loop sequence	CAAAUUGUUCAUCUGGAAGAACCUUCUUCCAGUAACUUCUUUGGAAGAAGGUUCUUCGGUAGAACAAAUUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003526588.3	ncRNA:24   UCCAAGAAGGUCUACUUGUUAAAC   1   *||--||||=|*|||||||||||| targets:993   UGG--CUUCUAAAUGAACAAUUUG   1014 Target Full Sequence	2.5	PREDICTED: Glycine max replication factor C subunit 3-like (LOC100782652), mRNA	replication factor C subunit 3-like(LOC100782652)	coding protein	psRNATarget
XM_003523392.3	ncRNA:24   UCCAAGAAGGUCUACUUGUUAAAC   1   *||--||||=|*|||||||||||| targets:984   UGG--CUUCUAAAUGAACAAUUUG   1005 Target Full Sequence	2.5	PREDICTED: Glycine max replication factor C subunit 3-like (LOC100805231), mRNA	replication factor C subunit 3-like(LOC100805231)	coding protein	psRNATarget