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BaseInfo

ncRNA ID novel_gma_miR8327
Species Glycine max
Class miRNA
Genome position Chr12:15068733-15068825 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 24
Mature sequence(if miRNA) 70 - UUUUCAAAGACGUUGCUGAUGUAA - 93
Stem-loop(if miRNA) --  C                      -     A      G  CUUA
  AC UUAGCAACGUCUUUGAAAAUAG CAUUC AAGACG UG    C
  || |||||||||||||||||||||| ||||| |||||| ||
  UG AGUCGUUGCAGAAACUUUUAUC GUAAG UUCUGC AC    U
AA  U                      U     A      A  AACU
Stem-loop sequence ACCUUAGCAACGUCUUUGAAAAUAGCAUUCAAAGACGGUGCUUACUUCAACAACGUCUUAGAAUGUCUAUUUUCAAAGACGUUGCUGAUGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006603681.2
ncRNA:24   AAUGUAGUCGUUGCAGAAACUUUU   1
  *||=-||||||||||*||||||||
targets:509   CUAU-UCAGCAACGUGUUUGAAAA   531

1.5 PREDICTED: Glycine max E3 ubiquitin-protein ligase SINAT2-like (LOC100813966), transcript variant X2, mRNA E3 ubiquitin-protein ligase SINAT2-like(LOC100813966) coding protein psRNATarget
XM_003520169.3
ncRNA:24   AAUGUAGUCGUUGCAGAAACUUUU   1
  ||==||||*||||*||||||||||
targets:1063   UUGUAUCAUCAACUUCUUUGAAAA   1086

2.5 PREDICTED: Glycine max uncharacterized LOC100791586 (LOC100791586), mRNA uncharacterized LOC100791586(LOC100791586) coding protein psRNATarget