ncRNA ID | novel_gma_miR8327 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:15068733-15068825 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 24 |
Mature sequence(if miRNA) | 70 - UUUUCAAAGACGUUGCUGAUGUAA - 93 |
Stem-loop(if miRNA) |
--  C                      -     A      G  CUUA   AC UUAGCAACGUCUUUGAAAAUAG CAUUC AAGACG UG    C   || |||||||||||||||||||||| ||||| |||||| ||   UG AGUCGUUGCAGAAACUUUUAUC GUAAG UUCUGC AC    U AA  U                      U     A      A  AACU |
Stem-loop sequence | ACCUUAGCAACGUCUUUGAAAAUAGCAUUCAAAGACGGUGCUUACUUCAACAACGUCUUAGAAUGUCUAUUUUCAAAGACGUUGCUGAUGUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006603681.2 |
|
1.5 | PREDICTED: Glycine max E3 ubiquitin-protein ligase SINAT2-like (LOC100813966), transcript variant X2, mRNA | E3 ubiquitin-protein ligase SINAT2-like(LOC100813966) | coding protein | psRNATarget | |||||||||
XM_003520169.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100791586 (LOC100791586), mRNA | uncharacterized LOC100791586(LOC100791586) | coding protein | psRNATarget |