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BaseInfo

ncRNA ID novel_gma_miR8322
Species Glycine max
Class miRNA
Genome position Chr12:18032070-18032145 [-]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 23
Mature sequence(if miRNA) 1 - UAAAGAUAGUGUCGAGAUAAACU - 23
Stem-loop(if miRNA) --                        --G       AUG
  UUUAUCUCGACACUAUUUUUAUUU   AUGGGGC   U
  ||||||||||||||||||||||||   |||||||
  AAAUAGAGCUGUGAUAGAAAUAAG   UACCCUG   U
UC                        UUA       AAG
Stem-loop sequence UUUAUCUCGACACUAUUUUUAUUUGAUGGGGCAUGUUGAAGUCCCAUAUUGAAUAAAGAUAGUGUCGAGAUAAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775065.1
ncRNA:23   UCAAAUAGAGCUGUGAUAGAAAU   1
  |*|||||||||=|||||||||||
targets:1728   AAUUUAUCUCGGCACUAUCUUUA   1750

1.5 PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X4, mRNA uncharacterized LOC102659952(LOC102659952) coding protein psRNATarget
XM_014775059.1
ncRNA:23   UCAAAUAGAGCUGUGAUAGAAAU   1
  |*|||||||||=|||||||||||
targets:1581   AAUUUAUCUCGGCACUAUCUUUA   1603

1.5 PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X1, mRNA uncharacterized LOC102659952(LOC102659952) coding protein psRNATarget
XM_014775066.1
ncRNA:23   UCAAAUAGAGCUGUGAUAGAAAU   1
  |*|||||||||=|||||||||||
targets:1725   AAUUUAUCUCGGCACUAUCUUUA   1747

1.5 PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X5, mRNA uncharacterized LOC102659952(LOC102659952) coding protein psRNATarget
XM_014775062.1
ncRNA:23   UCAAAUAGAGCUGUGAUAGAAAU   1
  |*|||||||||=|||||||||||
targets:1726   AAUUUAUCUCGGCACUAUCUUUA   1748

1.5 PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X3, mRNA uncharacterized LOC102659952(LOC102659952) coding protein psRNATarget
XM_014775060.1
ncRNA:23   UCAAAUAGAGCUGUGAUAGAAAU   1
  |*|||||||||=|||||||||||
targets:1726   AAUUUAUCUCGGCACUAUCUUUA   1748

1.5 PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X2, mRNA uncharacterized LOC102659952(LOC102659952) coding protein psRNATarget
XM_006590969.2
ncRNA:23   UCAAAUAGAGCUGUGAUAGAAAU   1
  |||||||||=||||||||*||||
targets:2295   AGUUUAUCUUGACACUAUGUUUA   2317

2.5 PREDICTED: Glycine max uncharacterized LOC100797428 (LOC100797428), transcript variant X3, mRNA uncharacterized LOC100797428(LOC100797428) coding protein psRNATarget