Search result

BaseInfo

ncRNA ID	novel_gma_miR8315
Species	Glycine max
Class	miRNA
Genome position	Chr1:43824905-43824948 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451618
Length	21
Mature sequence(if miRNA)	1 - UCUUUUAGUGCCACGUUGGAU - 21
Stem-loop(if miRNA)	--UC            G    A     UUUUAGUGCCAC UUGG U     |||||||||||| |||| A     AAAAUCACGGUG AACC G AGUU            -    U
Stem-loop sequence	UCUUUUAGUGCCACGUUGGAUAGUCCAAGUGGCACUAAAAUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763292.1	ncRNA:21   UAGGUUGCACCGUGAUUUUCU   1   **||||||||||||||||||* targets:1105   CCCCAACGUGGCACUAAAAGC   1125 Target Full Sequence	1.0	PREDICTED: Glycine max dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like (LOC100780758), transcript variant X1, mRNA	dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like(LOC100780758)	coding protein	psRNATarget
XM_014763293.1	ncRNA:21   UAGGUUGCACCGUGAUUUUCU   1   **||||||||||||||||||* targets:1420   CCCCAACGUGGCACUAAAAGC   1440 Target Full Sequence	1.0	PREDICTED: Glycine max dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like (LOC100780758), transcript variant X2, mRNA	dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like(LOC100780758)	coding protein	psRNATarget
XM_003556240.3	ncRNA:21   UAGGUUGCACCGUGAUUUUCU   1   **||||||||*|||||||||* targets:1139   CCCCAACGUGACACUAAAAGC   1159 Target Full Sequence	2.5	PREDICTED: Glycine max dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like (LOC100800280), mRNA	dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial-like(LOC100800280)	coding protein	psRNATarget