Search result

BaseInfo

ncRNA ID	novel_gma_miR8305
Species	Glycine max
Class	miRNA
Genome position	Chr8:14420142-14420187 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451618;SRR1451621
Length	21
Mature sequence(if miRNA)	1 - UUUUUGGUAGAUUUUGUUUCU - 21
Stem-loop(if miRNA)	--AGU          UG     U      UAGAAUUUAU  AAAAU A      ||||||||||  |||||      GUUUUAGAUG  UUUUA U UCUUU          GU     C
Stem-loop sequence	AGUUAGAAUUUAUUGAAAAUUAUCAUUUUUGGUAGAUUUUGUUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003556435.3	ncRNA:21   UCUUUGUUUUAGAUGGUUUUU   1   ***|||||||||||||||||* targets:3455   UCUAACAAAAUCUACCAAAAU   3475 Target Full Sequence	2.0	PREDICTED: Glycine max putative E3 ubiquitin-protein ligase LIN (LOC100815587), transcript variant X2, mRNA	putative E3 ubiquitin-protein ligase LIN(LOC100815587)	coding protein	psRNATarget
XM_006605461.2	ncRNA:21   UCUUUGUUUUAGAUGGUUUUU   1   ***|||||||||||||||||* targets:3495   UCUAACAAAAUCUACCAAAAU   3515 Target Full Sequence	2.0	PREDICTED: Glycine max putative E3 ubiquitin-protein ligase LIN (LOC100815587), transcript variant X1, mRNA	putative E3 ubiquitin-protein ligase LIN(LOC100815587)	coding protein	psRNATarget
XM_003551747.3	ncRNA:21   UCUUUGUUUUAGAUGGUUUUU   1   |||||*||||||*|||||||| targets:1447   AGAAAGAAAAUCCACCAAAAA   1467 Target Full Sequence	2.5	PREDICTED: Glycine max proline-rich receptor-like protein kinase PERK8 (LOC100784873), mRNA	proline-rich receptor-like protein kinase PERK8(LOC100784873)	coding protein	psRNATarget
XM_003538578.3	ncRNA:21   UCUUUGUUUUAGAUGGUUUUU   1   =*||||=|||||*|||||||| targets:367   GAAAACGAAAUCCACCAAAAA   387 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792492 (LOC100792492), mRNA	uncharacterized LOC100792492(LOC100792492)	coding protein	psRNATarget