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BaseInfo

ncRNA ID novel_gma_miR8299
Species Glycine max
Class miRNA
Genome position Chr8:726221-726346 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 21
Mature sequence(if miRNA) 106 - UUCCUCGGCUAUUUGCAUGCC - 126
Stem-loop(if miRNA) --     CU       A    U A      ---      ----------     UUU        --U   UU
  CAUGU  GAUAGCC AGGA G CUUGCC   UAGCUA          UUCCA   UAUGGGAC   UUA  U
  |||||  ||||||| |||| | ||||||   ||||||          |||||   ||||||||   |||
  GUACG  UUAUCGG UCCU C GAACGG   AUUGGU          GAGGU   AUACUCUG   AAU  A
CC     -U       C    U -      UUA      UUGAUUCCCA     ---        UUU   UA
Stem-loop sequence CAUGUCUGAUAGCCAAGGAUGACUUGCCUAGCUAUUCCAUUUUAUGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGGAGACCCUUAGUUUGGUUAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577272.2
ncRNA:21   CCGUACGUUUAUCGGCUCCUU   1
  ***|*|||||||||||||||=
targets:1087   AUGAAGCAAAUAGCCGAGGAG   1107

3.0 PREDICTED: Glycine max uncharacterized protein At5g41620-like (LOC100812498), mRNA uncharacterized protein At5g41620-like(LOC100812498) coding protein psRNATarget