ncRNA ID | novel_gma_miR8298 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:719118-719243 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 21 |
Mature sequence(if miRNA) | 106 - UUCCUCGGCUAUUUGCAUGCC - 126 |
Stem-loop(if miRNA) |
--     CU       A    U A      U     UU   UU   U   A      UUAAUUAA   CAUGU  GGUAGCC AGGA G CUUGCC AGUUA  CCA  UUA GGG CUUUAU        U   |||||  ||||||| |||| | |||||| |||||  |||  ||| ||| ||||||   GUACG  UUAUCGG UCCU C GAACGG UUAAU  GGU  GAU CCC GAGGUA        U CC     -U       C    U -      -     -U   UU   U   A      UACUCUGU |
Stem-loop sequence | CAUGUCUGGUAGCCAAGGAUGACUUGCCUAGUUAUUCCAUUUUAUGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGGAGACCCUUAGUUUGGUUAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006577272.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized protein At5g41620-like (LOC100812498), mRNA | uncharacterized protein At5g41620-like(LOC100812498) | coding protein | psRNATarget |