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BaseInfo

ncRNA ID	novel_gma_miR8297
Species	Glycine max
Class	miRNA
Genome position	Chr8:47133772-47133889 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451618
Length	21
Mature sequence(if miRNA)	98 - UUCUAAUUGGAGAACAACACU - 118
Stem-loop(if miRNA)	--                     A         G    GAACGUAUG    -CUU      U   UGUUGUUUUUCAAUUAGAAUU GAGUUUCAU UUGG         CUGA    UGAAUG A   ||||||||||||||||||||| ||||||||| ||||         ||||    ||||||   ACAACAAGAGGUUAAUCUUAA CUCAAAGUA AACU         GACU    AUUUAC A UC                     C         G    -----AUUA    UAUU      A
Stem-loop sequence	UGUUGUUUUUCAAUUAGAAUUAGAGUUUCAUGUUGGGAACGUAUGCUGACUUUGAAUGUAAACAUUUAUUAUUCAGAUUAUCAAGAUGAAACUCCAAUUCUAAUUGGAGAACAACACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003529886.3	ncRNA:21   UCACAACAAGAGGUUAAUCUU   1   =|||||||||||||||||||| targets:2227   GGUGUUGUUCUCCAAUUAGAA   2247 Target Full Sequence	0.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At2g46050, mitochondrial-like (LOC100778378), mRNA	pentatricopeptide repeat-containing protein At2g46050, mitochondrial-like(LOC100778378)	coding protein	psRNATarget
XM_006580313.2	ncRNA:21   UCACAACAAGAGGUUAAUCUU   1   =||||||||||||||*||||| targets:342   GGUGUUGUUCUCCAACUAGAA   362 Target Full Sequence	1.5	PREDICTED: Glycine max VQ motif-containing protein 31-like (LOC100807211), transcript variant X5, mRNA	VQ motif-containing protein 31-like(LOC100807211)	coding protein	psRNATarget
XM_003554034.3	ncRNA:21   UCACAACAAGAGGUUAAUCUU   1   =|||||||||||||||||*|| targets:2008   GGUGUUGUUCUCCAAUUAAAA   2028 Target Full Sequence	1.5	PREDICTED: Glycine max ABSCISIC ACID-INSENSITIVE 5-like protein 2 (LOC100783666), mRNA	ABSCISIC ACID-INSENSITIVE 5-like protein 2(LOC100783666)	coding protein	psRNATarget
XM_006584615.2	ncRNA:21   UCACAACAAGAGGUUAAUCUU   1   =*|||||||||||||*||||| targets:791   GAUGUUGUUCUCCAAGUAGAA   811 Target Full Sequence	1.5	PREDICTED: Glycine max VQ motif-containing protein 31-like (LOC100793117), transcript variant X2, mRNA	VQ motif-containing protein 31-like(LOC100793117)	coding protein	psRNATarget
XM_014778303.1	ncRNA:21   UCACAACAAGAGGUUAAUCUU   1   |*||*||||||||=||||||| targets:764   AUUGAUGUUCUCCGAUUAGAA   784 Target Full Sequence	2.5	PREDICTED: Glycine max serine-threonine kinase (LOC100305392), transcript variant X1, mRNA	serine-threonine kinase(LOC100305392)	coding protein	psRNATarget