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BaseInfo

ncRNA ID novel_gma_miR8296
Species Glycine max
Class miRNA
Genome position Chr8:44846845-44846943 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 24
Mature sequence(if miRNA) 76 - UUAUUUAUGUGGUUGUUCAUGACU - 99
Stem-loop(if miRNA) ----UUA    -          C   AGAA      -----            U
       AACA CCAUAUAAAU AGG    GAGUCA     UAAACCAAAAUU U
       |||| |||||||||| |||    ||||||     ||||||||||||
       UUGU GGUGUAUUUA UUU    UUUAGU     AUUUGGUUUUAG A
UCAGUAC    U          -   GAAC      AAGAA            A
Stem-loop sequence UUAAACACCAUAUAAAUCAGGAGAAGAGUCAUAAACCAAAAUUUUAAGAUUUUGGUUUAAAGAAUGAUUUCAAGUUUAUUUAUGUGGUUGUUCAUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006593762.2
ncRNA:24   UCAGUACUUGUUGGUGUAUUUAUU   1
  |*||=|*||||||||||||||*||
targets:116   AUUCGUCAACAACCACAUAAAGAA   139

2.5 PREDICTED: Glycine max amino acid permease 3 (LOC100775662), transcript variant X4, mRNA amino acid permease 3(LOC100775662) coding protein psRNATarget
XM_014766415.1
ncRNA:24   UCAGUACUUGUUGGUGUAUUUAUU   1
  |*||=|*||||||||||||||*||
targets:116   AUUCGUCAACAACCACAUAAAGAA   139

2.5 PREDICTED: Glycine max amino acid permease 3 (LOC100775662), transcript variant X3, mRNA amino acid permease 3(LOC100775662) coding protein psRNATarget