ncRNA ID | novel_gma_miR8296 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:44846845-44846943 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 24 |
Mature sequence(if miRNA) | 76 - UUAUUUAUGUGGUUGUUCAUGACU - 99 |
Stem-loop(if miRNA) |
----UUA    -          C   AGAA      -----            U        AACA CCAUAUAAAU AGG    GAGUCA     UAAACCAAAAUU U        |||| |||||||||| |||    ||||||     ||||||||||||        UUGU GGUGUAUUUA UUU    UUUAGU     AUUUGGUUUUAG A UCAGUAC    U          -   GAAC      AAGAA            A |
Stem-loop sequence | UUAAACACCAUAUAAAUCAGGAGAAGAGUCAUAAACCAAAAUUUUAAGAUUUUGGUUUAAAGAAUGAUUUCAAGUUUAUUUAUGUGGUUGUUCAUGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006593762.2 |
|
2.5 | PREDICTED: Glycine max amino acid permease 3 (LOC100775662), transcript variant X4, mRNA | amino acid permease 3(LOC100775662) | coding protein | psRNATarget | |||||||||
XM_014766415.1 |
|
2.5 | PREDICTED: Glycine max amino acid permease 3 (LOC100775662), transcript variant X3, mRNA | amino acid permease 3(LOC100775662) | coding protein | psRNATarget |