Search result

BaseInfo

ncRNA ID novel_gma_miR8293
Species Glycine max
Class miRNA
Genome position Chr7:12783089-12783134 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 20
Mature sequence(if miRNA) 27 - UCAUUAAAUCAAUUGUUCGU - 46
Stem-loop(if miRNA) --   G  GG         U   G
  GAA AA  UGAUUUGGU GAG A
  ||| ||  ||||||||| |||
  CUU UU  ACUAAAUUA CUU A
UG   G  -A         -   A
Stem-loop sequence GAAGAAGGUGAUUUGGUUGAGGAAAUUCAUUAAAUCAAUUGUUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006592868.2
ncRNA:20   UGCUUGUUAACUAAAUUACU   1
  *=|*||||||||||||||||
targets:2856   CUGUACAAUUGAUUUAAUGA   2875

2.0 PREDICTED: Glycine max TPR repeat-containing thioredoxin TTL1-like (LOC100804531), mRNA TPR repeat-containing thioredoxin TTL1-like(LOC100804531) coding protein psRNATarget