ncRNA ID | novel_gma_miR8292 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:646843-647043 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUAAAAUGUAAACUAUAGGACUU - 24 |
Stem-loop(if miRNA) |
--A    U                      C    - -   -     U       G           AC    A   -  ---CU      -------  -       U    UCUU AUAGUUUACAUUUUAAUUCUCU UUAG C CUU AGUUU AAAAGUG UCUUUUUAGUU  UAUA UUU CA     AUUCUC       CC UAUAGUU U    |||| |||||||||||||||||||||| |||| | ||| ||||| ||||||| |||||||||||  |||| ||| ||     ||||||       || |||||||    AGGA UAUCAAAUGUAAAAUUAAGAGA AAUC G GAA UCAAA UUUUUAU AGAAAAAUCAG  AUAU AAA GU     UAAGAG       GG AUAUUAA C UUC    -                      A    A A   A     -       A           GU    C   U  AAAAU      AAGAUUA  U       A |
Stem-loop sequence | AUCUUUAUAGUUUACAUUUUAAUUCUCUCUUAGCCUUAGUUUUAAAAGUGGUCUUUUUAGUUACUAUAAUUUCACUAUUCUCCCUAUAGUUUUCAAAUUAUAUGGAUUAGAAGAGAAUUAAAAUGUAAACUAUAUGGACUAAAAAGAAUAUUUUUAAACUAAAGAGACUAAAAGAGAAUUAAAAUGUAAACUAUAGGACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006577048.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget | |||||||||
XM_014773932.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget |