ncRNA ID | novel_gma_miR8290 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:27428528-27428605 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451618 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUUGGAAAAGAUCUAACAGACUCA - 24 |
Stem-loop(if miRNA) |
--         ---  A  A    U   A   GA      GA   AGUUUGUUA   CU UU CUAA GCU UUA  AAUGAA  A   |||||||||   || || |||| ||| |||  ||||||  A   UCAGACAAU   GA AA GGUU CGA AAU  UUACUU  A AC         CUA  A  -    -   -   -A      GA |
Stem-loop sequence | AGUUUGUUACUAUUACUAAUGCUAUUAGAAAUGAAGAAAAAGUUCAUUAUAAAGCUUGGAAAAGAUCUAACAGACUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014764284.1 |
|
2.5 | PREDICTED: Glycine max DNA topoisomerase 3-beta (LOC100791807), transcript variant X2, mRNA | DNA topoisomerase 3-beta(LOC100791807) | coding protein | psRNATarget | |||||||||
XM_003538488.3 |
|
2.5 | PREDICTED: Glycine max DNA topoisomerase 3-beta (LOC100791807), transcript variant X1, mRNA | DNA topoisomerase 3-beta(LOC100791807) | coding protein | psRNATarget |