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BaseInfo

ncRNA ID novel_gma_miR8281
Species Glycine max
Class miRNA
Genome position Chr5:16661559-16661619 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 22
Mature sequence(if miRNA) 40 - CCUGAAUCGGACAUCUGAGAGA - 61
Stem-loop(if miRNA) --      -    UA    C A        A
  UUUCGG UGUU  AUUU G GCGUGUCG U
  |||||| ||||  |||| | |||||||| A
  AGAGUC ACAG  UAAG C CGCGUAGU U
AG      U    GC    U -        G
Stem-loop sequence UUUCGGUGUUUAAUUUCGAGCGUGUCGAUAUGUGAUGCGCCUGAAUCGGACAUCUGAGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410576.1
ncRNA:22   AGAGAGUCUACAGGCUAAGUCC   1
  ||*|||=|||||||||||=|||
targets:6   UCACUCGGAUGUCCGAUUUAGG   27

2.5 Sequence 8701 from Patent EP2074227 NA coding protein psRNATarget
JB171037.1
ncRNA:22   AGAGAGUCUACAGGCUAAGUCC   1
  ||*|||=|||||||||||=|||
targets:6   UCACUCGGAUGUCCGAUUUAGG   27

2.5 Sequence 8701 from Patent EP2559767 NA coding protein psRNATarget
LQ242706.1
ncRNA:22   AGAGAGUCUACAGGCUAAGUCC   1
  ||*|||=|||||||||||=|||
targets:6   UCACUCGGAUGUCCGAUUUAGG   27

2.5 Sequence 8701 from Patent EP2985353 NA coding protein psRNATarget