Search result

BaseInfo

ncRNA ID novel_gma_miR8274
Species Glycine max
Class miRNA
Genome position Chr5:38544110-38544235 [+]
Reference genome Glycine_max_v2.0
Source SRR1451618
Length 21
Mature sequence(if miRNA) 106 - UUCCUCGGCUAUUUGCAUGCC - 126
Stem-loop(if miRNA) --     CU       A    U  A      UAACUAUU   UU UAC   A      UUAAUUAA
  CAUGU  GGUAGCC AGGA GG CUUGCC        CCA  C   GGG CUUUAU        U
  |||||  ||||||| |||| || ||||||        |||  |   ||| ||||||
  GUACG  UUAUCGG UCCU UC GAACGG        GGU  G   CCC GAAGUA        U
CC     -U       C    -  -      --UUAAAU   UU -UU   A      UACUCUGU
Stem-loop sequence CAUGUCUGGUAGCCAAGGAUGGACUUGCCUAACUAUUCCAUUCUACGGGACUUUAUUUAAUUAAUUUGUCUCAUAUGAAGACCCUUGUUUGGUAAAUUGGCAAGCUUCCUCGGCUAUUUGCAUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577272.2
ncRNA:21   CCGUACGUUUAUCGGCUCCUU   1
  ***|*|||||||||||||||=
targets:1087   AUGAAGCAAAUAGCCGAGGAG   1107

3.0 PREDICTED: Glycine max uncharacterized protein At5g41620-like (LOC100812498), mRNA uncharacterized protein At5g41620-like(LOC100812498) coding protein psRNATarget