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BaseInfo

ncRNA ID novel_gma_miR8271
Species Glycine max
Class miRNA
Genome position Chr8:7954061-7954219 [-]
Reference genome Glycine_max_v2.0
Source SRR1451617
Length 21
Mature sequence(if miRNA) 1 - UAAAAGCACUUAUGGAACUGC - 21
Stem-loop(if miRNA) --         U            C    U  C  CC        U         -C AUAAUCCACGUAAAAAAAGGUU
  AGUUCUAUA GUGCUUUUGGUG UGUU UC AA  AGAAUUAG GCUUCACCU  G                      U
  ||||||||| |||||||||||| |||| || ||  |||||||| |||||||||  |
  UCAAGGUAU CACGAAAAUCAC ACAA AG UU  UCUUAAUC CGAAGUGGA  C                      C
CG         U            A    U  A  AA        U         AU GUUGGAUAAAACUGGAAACUAC
Stem-loop sequence AGUUCUAUAUGUGCUUUUGGUGCUGUUUUCCAACCAGAAUUAGUGCUUCACCUCGAUAAUCCACGUAAAAAAAGGUUUCCAUCAAAGGUCAAAAUAGGUUGCUAAGGUGAAGCUCUAAUUCUAAUUAGAUAACAACACUAAAAGCACUUAUGGAACUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK243773.1
ncRNA:21   CGUCAAGGUAUUCACGAAAAU   1
  |||||||=|||*|||||||||
targets:967   GCAGUUCUAUAUGUGCUUUUA   987

2.5 Glycine max cDNA, clone: GMFL01-01-D14 NA coding protein psRNATarget