ncRNA ID | novel_gma_miR8271 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:7954061-7954219 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451617 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAAAAGCACUUAUGGAACUGC - 21 |
Stem-loop(if miRNA) |
--         U            C    U  C  CC        U         -C AUAAUCCACGUAAAAAAAGGUU   AGUUCUAUA GUGCUUUUGGUG UGUU UC AA  AGAAUUAG GCUUCACCU  G                      U   ||||||||| |||||||||||| |||| || ||  |||||||| |||||||||  |   UCAAGGUAU CACGAAAAUCAC ACAA AG UU  UCUUAAUC CGAAGUGGA  C                      C CG         U            A    U  A  AA        U         AU GUUGGAUAAAACUGGAAACUAC |
Stem-loop sequence | AGUUCUAUAUGUGCUUUUGGUGCUGUUUUCCAACCAGAAUUAGUGCUUCACCUCGAUAAUCCACGUAAAAAAAGGUUUCCAUCAAAGGUCAAAAUAGGUUGCUAAGGUGAAGCUCUAAUUCUAAUUAGAUAACAACACUAAAAGCACUUAUGGAACUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK243773.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-01-D14 | NA | coding protein | psRNATarget |