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BaseInfo

ncRNA ID novel_gma_miR8256
Species Glycine max
Class miRNA
Genome position Chr17:13023406-13023527 [-]
Reference genome Glycine_max_v2.0
Source SRR1451617
Length 25
Mature sequence(if miRNA) 1 - UUUCCAUAAACGAGGGAUCGAAAAG - 25
Stem-loop(if miRNA) ---          UA             UUCAA   -    CC     -AUUAACA     GA
   UUUGGUCCCU  UUUAUGGAAAUGU     GUG GGUU  UUGUU        CCGUU  C
   ||||||||||  |||||||||||||     ||| ||||  |||||        |||||
   AAGCUAGGGA  AAAUACCUUUACA     CAC UCAA  AACAG        GGUGA  U
GAA          GC             CAUUC   A    -A     GAAGGAAA     AG
Stem-loop sequence UUUGGUCCCUUAUUUAUGGAAAUGUUUCAAGUGGGUUCCUUGUUAUUAACACCGUUGACUGAAGUGGAAAGGAAGGACAAAAACUACACCUUACACAUUUCCAUAAACGAGGGAUCGAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001254637.2
ncRNA:25   GAAAAGCUAGGGAGCAAAUACCUUU   1
  *|*|||||||=||=|||||||||||
targets:1130   AUGUUCGAUCUCUUGUUUAUGGAAA   1154

2.5 Glycine max ankyrin-3-like (LOC100818162), mRNA ankyrin-3-like(LOC100818162) coding protein psRNATarget
AK244699.1
ncRNA:25   GAAAAGCUAGGGAGCAAAUACCUUU   1
  *|*|||||||=||=|||||||||||
targets:1485   AUGUUCGAUCUCUUGUUUAUGGAAA   1509

2.5 Glycine max cDNA, clone: GMFL01-10-N16 NA coding protein psRNATarget