ncRNA ID | novel_gma_miR8256 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:13023406-13023527 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451617 |
Length | 25 |
Mature sequence(if miRNA) | 1 - UUUCCAUAAACGAGGGAUCGAAAAG - 25 |
Stem-loop(if miRNA) |
---          UA             UUCAA   -    CC     -AUUAACA     GA    UUUGGUCCCU  UUUAUGGAAAUGU     GUG GGUU  UUGUU        CCGUU  C    ||||||||||  |||||||||||||     ||| ||||  |||||        |||||    AAGCUAGGGA  AAAUACCUUUACA     CAC UCAA  AACAG        GGUGA  U GAA          GC             CAUUC   A    -A     GAAGGAAA     AG |
Stem-loop sequence | UUUGGUCCCUUAUUUAUGGAAAUGUUUCAAGUGGGUUCCUUGUUAUUAACACCGUUGACUGAAGUGGAAAGGAAGGACAAAAACUACACCUUACACAUUUCCAUAAACGAGGGAUCGAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001254637.2 |
|
2.5 | Glycine max ankyrin-3-like (LOC100818162), mRNA | ankyrin-3-like(LOC100818162) | coding protein | psRNATarget | |||||||||
AK244699.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-10-N16 | NA | coding protein | psRNATarget |