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BaseInfo

ncRNA ID novel_gma_miR8252
Species Glycine max
Class miRNA
Genome position Chr15:27322487-27322661 [-]
Reference genome Glycine_max_v2.0
Source SRR1451617
Length 24
Mature sequence(if miRNA) 1 - AUUGGUGCUGAUUCUUCUAGUGAG - 24
Stem-loop(if miRNA) --        U                  -  UC      G                     C     A          -         
  CACUAGAA GAUCAGCACCAAUCUGUG CU  UUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUUUGUUUU GUAAAUUACA
  |||||||| |||||||||||||||||| ||  |||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||G
  GUGAUCUU UUAGUCGUGGUUAGGUAC GA  AAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GGAAACGAAA CAUUUGAUGU
GA        C                  U  -C      G                     C     -          A         
Stem-loop sequence CACUAGAAUGAUCAGCACCAAUCUGUGCUUCUUCCUCGUCUACCAGCUCAAUAUCUUUCCUUUCAACUUUUGUUUUGUAAAUUACAGUGUAGUUUACAAAAGCAAAGGUGAAACGAAAGAUAUUGAGCUGGUAGAGGAGGAACAGUCAUGGAUUGGUGCUGAUUCUUCUAGUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766177.1
ncRNA:24   GAGUGAUCUUCUUAGUCGUGGUUA   1
  ***||*|||||||||||||||||*
targets:416   AAAACAAGAAGAAUCAGCACCAAA   439

2.0 PREDICTED: Glycine max uncharacterized LOC106795597 (LOC106795597), mRNA uncharacterized LOC106795597(LOC106795597) coding protein psRNATarget
XM_014773249.1
ncRNA:24   GAGUGAUCUUCUUAGUCGUGGUUA   1
  ***||*|||||||||||||||||*
targets:1530   AAAACAAGAAGAAUCAGCACCAAA   1553

2.0 PREDICTED: Glycine max uncharacterized LOC100788241 (LOC100788241), mRNA uncharacterized LOC100788241(LOC100788241) coding protein psRNATarget
XM_003520454.3
ncRNA:24   GAGUGAUCUUCUUAGUCGUGGUUA   1
  ***||*|||||||||||||||||*
targets:3341   AAAACAAGAAGAAUCAGCACCAAA   3364

2.0 PREDICTED: Glycine max uncharacterized LOC100804484 (LOC100804484), mRNA uncharacterized LOC100804484(LOC100804484) coding protein psRNATarget