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BaseInfo

ncRNA ID novel_gma_miR8247
Species Glycine max
Class miRNA
Genome position Chr8:30677291-30677404 [+]
Reference genome Glycine_max_v2.0
Source SRR1451616
Length 21
Mature sequence(if miRNA) 94 - CGACAGUUCCAAUUCCCUGGC - 114
Stem-loop(if miRNA) --   A          C   A         CA   GA    C  -----     A   UC
  CAG GAAUUGGAAU GUC GAUGAAGAU  GAU  UUCA AU     CUCAA UGG  C
  ||| |||||||||| ||| |||||||||  |||  |||| ||     ||||| |||
  GUC CUUAACCUUG CAG CUACUUUUA  CUG  GAGU UA     GAGUU AUU  A
CG   C          A   C         AC   UC    C  AAAUU     -   UA
Stem-loop sequence CAGAGAAUUGGAAUCGUCAGAUGAAGAUCAGAUGAUUCACAUCUCAAAUGGUCCAAUUUAUUGAGUUAAAAUCUGAGCUGUCCAAUUUUCAUCCGACAGUUCCAAUUCCCUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771206.1
ncRNA:21   CGGUCCCUUAACCUUGACAGC   1
  |*||*|||||||*||||||||
targets:1418   GACAUGGAAUUGAAACUGUCG   1438

2.5 PREDICTED: Glycine max RNA-binding KH domain-containing protein PEPPER-like (LOC100799689), transcript variant X2, mRNA RNA-binding KH domain-containing protein PEPPER-like(LOC100799689) coding protein psRNATarget