ncRNA ID | novel_gma_miR8240 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:17913779-17913869 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294476 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAAACGGAGGAUGUCAGGCUUGAU - 24 |
Stem-loop(if miRNA) |
GAAAC     -------AUG         -   A   UCCA       UUAA      GGAGG          UCAGGCUUG AUG UUU    AAACUUC    U      |||||          ||||||||| ||| |||    |||||||    G      CCUUC          GGUCCGGGC UAC AGA    UUUGAAG    A ----A     GCUAUUUUCA         C   C   ----       UUCA |
Stem-loop sequence | GAAACGGAGGAUGUCAGGCUUGAUGAUUUUCCAAAACUUCUUAAUGAACUUGAAGUUUAGACCAUCCGGGCCUGGACUUUUAUCGCUUCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003530884.3 |
|
2.5 | PREDICTED: Glycine max 40S ribosomal protein S16-like (LOC100816874), mRNA | 40S ribosomal protein S16-like(LOC100816874) | coding protein | psRNATarget |