ncRNA ID | novel_gma_miR8239 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:23856488-23856640 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451616;SRR1451617;SRR1451624;SRR1451625;SRR1451627 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAAUGUUGAUGAUGCUUACACU - 22 |
Stem-loop(if miRNA) |
--    C    G                      CAGU              UAUGUUAGUUUAACAUCGGUUUUCUA   UGUA GCAU AUCAACGUUGACAUCGGUUUUC    AAAACCGAUGUUAA                          G   |||| |||| ||||||||||||||||||||||    ||||||||||||||                          A   ACAU CGUA UAGUUGUAACUGUAGCUAAAAG    AUCUUUUUGGCUAC                          A UC    U    G                      ----              AAUUCCCGUAUGUAAUUGUAGCCAAA |
Stem-loop sequence | UGUACGCAUGAUCAACGUUGACAUCGGUUUUCCAGUAAAACCGAUGUUAAUAUGUUAGUUUAACAUCGGUUUUCUAGAAAAACCGAUGUUAAUGUAUGCCCUUAACAUCGGUUUUUCUAGAAAAUCGAUGUCAAUGUUGAUGAUGCUUACACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT097820.1 |
|
2.5 | Soybean clone JCVI-FLGm-22H21 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
BT097833.1 |
|
2.5 | Soybean clone JCVI-FLGm-22J21 unknown mRNA | NA | coding protein | psRNATarget |