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BaseInfo

ncRNA ID novel_gma_miR8239
Species Glycine max
Class miRNA
Genome position Chr5:23856488-23856640 [-]
Reference genome Glycine_max_v2.0
Source SRR1451616;SRR1451617;SRR1451624;SRR1451625;SRR1451627
Length 22
Mature sequence(if miRNA) 1 - CAAUGUUGAUGAUGCUUACACU - 22
Stem-loop(if miRNA) --    C    G                      CAGU              UAUGUUAGUUUAACAUCGGUUUUCUA
  UGUA GCAU AUCAACGUUGACAUCGGUUUUC    AAAACCGAUGUUAA                          G
  |||| |||| ||||||||||||||||||||||    ||||||||||||||                          A
  ACAU CGUA UAGUUGUAACUGUAGCUAAAAG    AUCUUUUUGGCUAC                          A
UC    U    G                      ----              AAUUCCCGUAUGUAAUUGUAGCCAAA
Stem-loop sequence UGUACGCAUGAUCAACGUUGACAUCGGUUUUCCAGUAAAACCGAUGUUAAUAUGUUAGUUUAACAUCGGUUUUCUAGAAAAACCGAUGUUAAUGUAUGCCCUUAACAUCGGUUUUUCUAGAAAAUCGAUGUCAAUGUUGAUGAUGCUUACACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097820.1
ncRNA:22   UCACAUUCGUAGUAGUUGUAAC   1
  |||||||*||*|||||||||||
targets:694   AGUGUAAACAACAUCAACAUUG   715

2.5 Soybean clone JCVI-FLGm-22H21 unknown mRNA NA coding protein psRNATarget
BT097833.1
ncRNA:22   UCACAUUCGUAGUAGUUGUAAC   1
  |||||||*||*|||||||||||
targets:694   AGUGUAAACAACAUCAACAUUG   715

2.5 Soybean clone JCVI-FLGm-22J21 unknown mRNA NA coding protein psRNATarget