ncRNA ID | novel_gma_miR8237 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:33673163-33673291 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451616 |
Length | 24 |
Mature sequence(if miRNA) | 106 - AUGAGUCAUACGGAUUAACAAUUC - 129 |
Stem-loop(if miRNA) |
--    G                      ----------      UU      AAAC            U   AUGA UCAUACGGAUUAACAAUUCGUA          AGAAUU  UUUUAU    UUUUAAUUAUUU A   |||| ||||||||||||||||||||||          ||||||  ||||||    |||||||||||| A   UACU AGUAUGCCUAGUUGUUAGGCAU          UUUUAA  AAAAUG    AAAAUUAAUAAA A AG    G                      ACUAAAAAAA      UU      --AA            A |
Stem-loop sequence | AUGAGUCAUACGGAUUAACAAUUCGUAAGAAUUUUUUUUAUAAACUUUUAAUUAUUUUAAAAAAAUAAUUAAAAAAGUAAAAUUAAUUUUAAAAAAAUCAUACGGAUUGUUGAUCCGUAUGAGUCAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520377.2 |
|
2.5 | PREDICTED: Glycine max phospholipase A(1) DAD1, chloroplastic-like (LOC100788424), mRNA | phospholipase A(1) DAD1, chloroplastic-like(LOC100788424) | coding protein | psRNATarget |