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BaseInfo

ncRNA ID novel_gma_miR8237
Species Glycine max
Class miRNA
Genome position Chr4:33673163-33673291 [-]
Reference genome Glycine_max_v2.0
Source SRR1451616
Length 24
Mature sequence(if miRNA) 106 - AUGAGUCAUACGGAUUAACAAUUC - 129
Stem-loop(if miRNA) --    G                      ----------      UU      AAAC            U
  AUGA UCAUACGGAUUAACAAUUCGUA          AGAAUU  UUUUAU    UUUUAAUUAUUU A
  |||| ||||||||||||||||||||||          ||||||  ||||||    |||||||||||| A
  UACU AGUAUGCCUAGUUGUUAGGCAU          UUUUAA  AAAAUG    AAAAUUAAUAAA A
AG    G                      ACUAAAAAAA      UU      --AA            A
Stem-loop sequence AUGAGUCAUACGGAUUAACAAUUCGUAAGAAUUUUUUUUAUAAACUUUUAAUUAUUUUAAAAAAAUAAUUAAAAAAGUAAAAUUAAUUUUAAAAAAAUCAUACGGAUUGUUGAUCCGUAUGAGUCAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003520377.2
ncRNA:24   CUUAACAAUUAGGCAUACUGAGUA   1
  |||--|||*|||||||||||*|||
targets:1918   GAA--GUUCAUCCGUAUGACCCAU   1939

2.5 PREDICTED: Glycine max phospholipase A(1) DAD1, chloroplastic-like (LOC100788424), mRNA phospholipase A(1) DAD1, chloroplastic-like(LOC100788424) coding protein psRNATarget