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BaseInfo

ncRNA ID novel_gma_miR8228
Species Glycine max
Class miRNA
Genome position Chr19:18874486-18874581 [-]
Reference genome Glycine_max_v2.0
Source SRR1451616
Length 24
Mature sequence(if miRNA) 73 - AUUAAGGAGAAGGCUAAUUUGUAG - 96
Stem-loop(if miRNA) --        G    -        U   A     GA  GAC       AU
  AUUAAGGA AAGG CUAAUUUG AGU CAUGG  GG   UAUGUCG  U
  |||||||| |||| |||||||| ||| |||||  ||   |||||||
  UAAUUCUU UUCU GGUUAAGC UCA GUACC  CC   AUGUAGU  A
AC        A    U        -   -     -G  AAC       AG
Stem-loop sequence AUUAAGGAGAAGGCUAAUUUGUAGUACAUGGGAGGGACUAUGUCGAUUAGAUGAUGUACAACCGCCAUGACUCGAAUUGGUUCUUAUUCUUAAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003555677.3
ncRNA:24   GAUGUUUAAUCGGAAGAGGAAUUA   1
  **|*|||||||||*|||||||||*
targets:1907   AAAAAAAUUAGCCCUCUCCUUAAG   1930

2.5 PREDICTED: Glycine max probable indole-3-pyruvate monooxygenase YUCCA7 (LOC100813983), mRNA probable indole-3-pyruvate monooxygenase YUCCA7(LOC100813983) coding protein psRNATarget