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BaseInfo

ncRNA ID novel_gma_miR8199
Species Glycine max
Class miRNA
Genome position Chr15:15647151-15647297 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 20
Mature sequence(if miRNA) 1 - UUAAGUGAUGACGUGACAAA - 20
Stem-loop(if miRNA) --         GAC  G   AAC           A    --- --AA    U     G         C C    GA
  UUAAGUGAU   GU ACA   GGAGUGUCAUG CGUC   C    UCAC GACAU UCAUUGUCA G CAUU  A
  |||||||||   || |||   ||||||||||| ||||   |    |||| ||||| ||||||||| | ||||
  AAUUCACUA   CA UGU   CCUUACGGUGC GUAG   G    AGUG UUGUG AGUAACAGU C GUAG  A
GC         AUA  A   CUA           A    UAU GAAC    U     G         A A    UG
Stem-loop sequence UUAAGUGAUGACGUGACAAACGGAGUGUCAUGACGUCCAAUCACUGACAUGUCAUUGUCACGCCAUUGAAAGUGAUGACAUGACAAUGAGGUGUUUGUGACAAGGUAUGAUGACGUGGCAUUCCAUCUGUAACAUAAUCACUUAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:20   AAACAGUGCAGUAGUGAAUU   1
  |||*||||||||||||||||
targets:764   UUUAUCACGUCAUCACUUAA   783

1.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget
XM_003553291.3
ncRNA:20   AAACAGUGCAGUAGU-GAAUU   1
  *||||||||||||||-|||||
targets:529   AUUGUCACGUCAUCAUCUUAA   549

3.0 PREDICTED: Glycine max mavicyanin-like (LOC100780078), mRNA mavicyanin-like(LOC100780078) coding protein psRNATarget