ncRNA ID | novel_gma_miR8199 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:15647151-15647297 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUAAGUGAUGACGUGACAAA - 20 |
Stem-loop(if miRNA) |
--         GAC  G   AAC           A    --- --AA    U     G         C C    GA   UUAAGUGAU   GU ACA   GGAGUGUCAUG CGUC   C    UCAC GACAU UCAUUGUCA G CAUU  A   |||||||||   || |||   ||||||||||| ||||   |    |||| ||||| ||||||||| | ||||   AAUUCACUA   CA UGU   CCUUACGGUGC GUAG   G    AGUG UUGUG AGUAACAGU C GUAG  A GC         AUA  A   CUA           A    UAU GAAC    U     G         A A    UG |
Stem-loop sequence | UUAAGUGAUGACGUGACAAACGGAGUGUCAUGACGUCCAAUCACUGACAUGUCAUUGUCACGCCAUUGAAAGUGAUGACAUGACAAUGAGGUGUUUGUGACAAGGUAUGAUGACGUGGCAUUCCAUCUGUAACAUAAUCACUUAACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766262.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA | uncharacterized LOC100804377(LOC100804377) | coding protein | psRNATarget | |||||||||
XM_003553291.3 |
|
3.0 | PREDICTED: Glycine max mavicyanin-like (LOC100780078), mRNA | mavicyanin-like(LOC100780078) | coding protein | psRNATarget |