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BaseInfo

ncRNA ID novel_gma_miR8195
Species Glycine max
Class miRNA
Genome position Chr15:14722150-14722235 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 1 - AGAGAACCGUCUUAGAAUGUAUUU - 24
Stem-loop(if miRNA) ---AUA             -G      A       UUAAAAU    A
      AUUCUAAGAUGGU  UUUAGA AACCGUC       AUAG C
      |||||||||||||  |||||| |||||||       |||| A
      UAAGAUUCUGCCA  AGAUUU UUGGCAG       UAUC A
UUUAUG             AG      C       -------    U
Stem-loop sequence AUAAUUCUAAGAUGGUGUUUAGAAAACCGUCUUAAAAUAUAGACAAUCUAUGACGGUUCUUUAGAGAACCGUCUUAGAAUGUAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   UUUAUGUAAGAUUCUGCCAAGAGA   1
  ||||||||||||||||||||||||
targets:2605   AAAUACAUUCUAAGACGGUUCUCU   2628

0.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014771087.1
ncRNA:24   UUUAUGUAAGAUUCUGCCAAGAGA   1
  |||*||||||||||||||||||=|
targets:2509   AAACACAUUCUAAGACGGUUCUUU   2532

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014763138.1
ncRNA:24   UUUAUGUAAGAUUCUGCCAAGAGA   1
  |||||||||||||||=||||||||
targets:1523   AAAUACAUUCUAAGAUGGUUCUCU   1546

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:24   UUUAUGUAAGAUUCUGCCAAGAGA   1
  |||||||||||||||=||||||||
targets:2232   AAAUACAUUCUAAGAUGGUUCUCU   2255

1.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_003535430.3
ncRNA:24   UUUA-UGUAAGAUUCUGCCAAGAGA   1
  ==||-||||**|||||||||||||*
targets:1554   GGAUGACAUGAUAAGACGGUUCUCG   1578

3.0 PREDICTED: Glycine max uncharacterized LOC100818182 (LOC100818182), mRNA uncharacterized LOC100818182(LOC100818182) coding protein psRNATarget