Search result

BaseInfo

ncRNA ID novel_gma_miR8192
Species Glycine max
Class miRNA
Genome position Chr15:19669799-19669879 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615;SRR1451621
Length 21
Mature sequence(if miRNA) 61 - UUUUGUCAUUGUAAAUUGAGC - 81
Stem-loop(if miRNA) --                              UUGUG     G
  UUUUGUCAUUGUAAAUUGAGCAUUAGCUCU     AAGGG A
  ||||||||||||||||||||||||||||||     |||||
  AAGACAGUAACAUUUAACUCGUAAUCGAGG     UUCCC A
AA                              -----     A
Stem-loop sequence UUUUGUCAUUGUAAAUUGAGCAUUAGCUCUUUGUGAAGGGGAAACCCUUGGAGCUAAUGCUCAAUUUACAAUGACAGAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539417.3
ncRNA:21   CGAGUUAAAUGUUACUGUU-UU   1
  |||||||||||||||||||-||
targets:3383   GCUCAAUUUACAAUGACAACAA   3404

3.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At2g27610 (LOC100818767), mRNA pentatricopeptide repeat-containing protein At2g27610(LOC100818767) coding protein psRNATarget