ncRNA ID | novel_gma_miR8188 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:35887916-35888113 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCAAGGACUAAAAACAAAAAUU - 22 |
Stem-loop(if miRNA) |
--UUUC                   ---------UUUCUU   U CUUAAUUUUAGUGCUUGAAUUUUUUUUGCAUCCUUACUUUUAAUCCUUUUAAGGGACUA       UGUUUUUAGUCCUUGAACU               UCA C                                                           A       |||||||||||||||||||               ||| |       ACAAAAAUCAGGAACUUGA               AUA A                                                           A UUAAAA                   UAAAAAUUGAUAAAA   - GGAAAUUGUAACAAAUAGUUGGAAUGAAAAACAGGGAAUUGAAAAACAGGUAGGAAUGA |
Stem-loop sequence | UUUCUGUUUUUAGUCCUUGAACUUUUCUUUCAUCCUUAAUUUUAGUGCUUGAAUUUUUUUUGCAUCCUUACUUUUAAUCCUUUUAAGGGACUAAAAGUAAGGAUGGACAAAAAGUUAAGGGACAAAAAGUAAGGUUGAUAAACAAUGUUAAAGGAAUAAAAAUAGUUAAAAAUAGUUCAAGGACUAAAAACAAAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532761.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100819385 (LOC100819385), mRNA | uncharacterized LOC100819385(LOC100819385) | coding protein | psRNATarget |