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BaseInfo

ncRNA ID novel_gma_miR8188
Species Glycine max
Class miRNA
Genome position Chr15:35887916-35888113 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 22
Mature sequence(if miRNA) 1 - UCAAGGACUAAAAACAAAAAUU - 22
Stem-loop(if miRNA) --UUUC                   ---------UUUCUU   U CUUAAUUUUAGUGCUUGAAUUUUUUUUGCAUCCUUACUUUUAAUCCUUUUAAGGGACUA
      UGUUUUUAGUCCUUGAACU               UCA C                                                           A
      |||||||||||||||||||               ||| |
      ACAAAAAUCAGGAACUUGA               AUA A                                                           A
UUAAAA                   UAAAAAUUGAUAAAA   - GGAAAUUGUAACAAAUAGUUGGAAUGAAAAACAGGGAAUUGAAAAACAGGUAGGAAUGA
Stem-loop sequence UUUCUGUUUUUAGUCCUUGAACUUUUCUUUCAUCCUUAAUUUUAGUGCUUGAAUUUUUUUUGCAUCCUUACUUUUAAUCCUUUUAAGGGACUAAAAGUAAGGAUGGACAAAAAGUUAAGGGACAAAAAGUAAGGUUGAUAAACAAUGUUAAAGGAAUAAAAAUAGUUAAAAAUAGUUCAAGGACUAAAAACAAAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532761.2
ncRNA:22   UUAAAAACAAAAAUCAGGAACU   1
  *|||*||*||||||||||||||
targets:1559   UAUUCUUUUUUUUAGUCCUUGA   1580

2.0 PREDICTED: Glycine max uncharacterized LOC100819385 (LOC100819385), mRNA uncharacterized LOC100819385(LOC100819385) coding protein psRNATarget