ncRNA ID | novel_gma_miR8185 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:8497804-8497921 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUUAUUGGACGUUGACCACC - 21 |
Stem-loop(if miRNA) |
--         A        A      C UG GA      G   GGUUGA        AG U   UUUUAUUGG CGUUGACC CCACGU U  U  UUUUAU GGA      CGUUAAUU  G G   ||||||||| |||||||| |||||| |  |  |||||| |||      ||||||||  |   AAAAUAACC GCAACUGG GGUGUA A  G  AAAAUA CCU      GCAAUUAA  C C CG         C        C      C GU UG      A   ------        AA A |
Stem-loop sequence | UUUUAUUGGACGUUGACCACCACGUCUUGUGAUUUUAUGGGAGGUUGACGUUAAUUAGGUGCACAAAAUUAACGUCCAAUAAAAGUGUGACAUGUGGCGGUCAACGCCCAAUAAAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003545763.3 |
|
1.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like (LOC100810110), transcript variant X1, mRNA | pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like(LOC100810110) | coding protein | psRNATarget | |||||||||
XM_006598012.2 |
|
1.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like (LOC100810110), transcript variant X2, mRNA | pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like(LOC100810110) | coding protein | psRNATarget |