ncRNA ID | novel_gma_miR8174 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:13380123-13380259 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAGGUUUUUUUACCAACGUCGGCU - 24 |
Stem-loop(if miRNA) |
--           AC       G   U      G  UU      --AUC   UAGGGUCUUUUCAAACG   UAGGUUUUUUU  CAACGUC GCU GGGUUU UU  GUCGAC     GGU                 A   |||||||||||  ||||||| ||| |||||| ||  ||||||     |||                 C   AUCUAAAAAAA  GUUGCGG CGA CUUAAA AA  CAGCUG     GAU                 A CC           CA       A   U      A  UC      CAACC   UUUUAUCACAACCAGUU |
Stem-loop sequence | UAGGUUUUUUUACCAACGUCGGCUUGGGUUUGUUUUGUCGACAUCGGUUAGGGUCUUUUCAAACGACAUUGACCAACACUAUUUUUAGCCAACGUCGACCUAAAAAAUUCUAGCAGGCGUUGACAAAAAAAUCUACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767165.1 |
|
2.5 | PREDICTED: Glycine max spore wall protein 2-like (LOC100819175), mRNA | spore wall protein 2-like(LOC100819175) | coding protein | psRNATarget |