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BaseInfo

ncRNA ID	novel_gma_miR8172
Species	Glycine max
Class	miRNA
Genome position	Chr14:12814946-12815180 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451615
Length	25
Mature sequence(if miRNA)	211 - UUAACGAUCAACGUCCAAUUGUAGU - 235
Stem-loop(if miRNA)	--C               C                    U C   A      A                 ---A     CA         UUA     UAA   AAAACAGCAAUGCAU    ACAAUUGGACGUUGA CGUUAACAAGUGAUGUUGAC G CAC UGUCAC UUCUUAUUGGAUGAUGA    UGUCA  UGUCAUGUU   AUUGG   AUG               U    ||||||||||||||| |||||||||||||||||||| | ||| |||||| |||||||||||||||||    |||||  |||||||||   |||||   |||    UGUUAACCUGCAACU GCAAUUGUUCACUACAACUG C GUG ACAGUG AAGAAUGAUCUACUACU    ACAGU  ACAGUACAA   UAACC   AGU               U UGA               A                    U A   C      C                 ACUG     AC         UAC     UAC   UGAGGUACUUUCUAC
Stem-loop sequence	CACAAUUGGACGUUGACCGUUAACAAGUGAUGUUGACUGCCACAUGUCACAUUCUUAUUGGAUGAUGAAUGUCACAUGUCAUGUUUUAAUUGGUAAAUGAAAACAGCAAUGCAUUUCAUCUUUCAUGGAGUUGACAUCCAAUCAUAACAUGACACAUGACAGUCAUCAUCAUCUAGUAAGAACGUGACACGUGACUGUCAACAUCACUUGUUAACGAUCAACGUCCAAUUGUAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006583172.2	ncRNA:25   UGAUGUUAACCUGCAACUAGCAAUU   1   *||-||||||||||||||*|||||| targets:847   UCU-CAAUUGGACGUUGACCGUUAA   870 Target Full Sequence	1.5	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC102661536), transcript variant X4, mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC102661536)	coding protein	psRNATarget
XM_006583171.2	ncRNA:25   UGAUGUUAACCUGCAACUAGCAAUU   1   *||-||||||||||||||*|||||| targets:881   UCU-CAAUUGGACGUUGACCGUUAA   904 Target Full Sequence	1.5	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC102661536), transcript variant X3, mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC102661536)	coding protein	psRNATarget
XM_014777745.1	ncRNA:25   UGAUGUUAACCUGCAACUAGCAAUU   1   *||-||||||||||||||*|||||| targets:886   UCU-CAAUUGGACGUUGACCGUUAA   909 Target Full Sequence	1.5	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC102661536), transcript variant X1, mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC102661536)	coding protein	psRNATarget
XM_006583170.2	ncRNA:25   UGAUGUUAACCUGCAACUAGCAAUU   1   *||-||||||||||||||*|||||| targets:1581   UCU-CAAUUGGACGUUGACCGUUAA   1604 Target Full Sequence	1.5	PREDICTED: Glycine max leucine-rich repeat receptor-like protein kinase PXC1 (LOC102661536), transcript variant X2, mRNA	leucine-rich repeat receptor-like protein kinase PXC1(LOC102661536)	coding protein	psRNATarget
JB170906.1	ncRNA:25   UGAUGUUAACCUGCAACUAGCAAUU   1   |=*|=|||||*|||||*|||||||| targets:8   AUCAUAAUUGAACGUUAAUCGUUAA   32 Target Full Sequence	2.5	Sequence 8570 from Patent EP2559767	NA	coding protein	psRNATarget
HI410445.1	ncRNA:25   UGAUGUUAACCUGCAACUAGCAAUU   1   |=*|=|||||*|||||*|||||||| targets:8   AUCAUAAUUGAACGUUAAUCGUUAA   32 Target Full Sequence	2.5	Sequence 8570 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242575.1	ncRNA:25   UGAUGUUAACCUGCAACUAGCAAUU   1   |=*|=|||||*|||||*|||||||| targets:8   AUCAUAAUUGAACGUUAAUCGUUAA   32 Target Full Sequence	2.5	Sequence 8570 from Patent EP2985353	NA	coding protein	psRNATarget