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BaseInfo

ncRNA ID	novel_gma_miR8170
Species	Glycine max
Class	miRNA
Genome position	Chr14:11339542-11339648 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451615
Length	22
Mature sequence(if miRNA)	1 - AAGAAAAAUGAAGAAAGGAGCU - 22
Stem-loop(if miRNA)	A       U          --   - --UC       --AUA    GUG       A  AGAAAAA GAAGAAAGGA  GCU C    UCUAUAU     GGGA   AAACACU U  ||||||| ||||||||||  ||| |    |||||||     ||||   ||||||| U  UUUUUUU CUUCUUUUUU  CGA G    GGGUGUA     UCCU   UUUGUGA C -       U          UC   A UUCA       GUGAG    --A       A
Stem-loop sequence	AAGAAAAAUGAAGAAAGGAGCUCUCUCUAUAUAUAGGGAGUGAAACACUAUUCAAGUGUUUAUCCUGAGUGAUGUGGGACUUGAAGCCUUUUUUUCUUCUUUUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014769191.1	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **|||||||||||||*|||||| targets:823   CCCUCCUUUCUUCAUAUUUCUU   844 Target Full Sequence	1.5	PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100792254), transcript variant X2, mRNA	UPF0481 protein At3g47200-like(LOC100792254)	coding protein	psRNATarget
XM_006599400.2	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **|||||||||||||*|||||| targets:830   CCCUCCUUUCUUCAUAUUUCUU   851 Target Full Sequence	1.5	PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100792254), transcript variant X3, mRNA	UPF0481 protein At3g47200-like(LOC100792254)	coding protein	psRNATarget
XM_003548041.3	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **|||||||||||||*|||||| targets:823   CCCUCCUUUCUUCAUAUUUCUU   844 Target Full Sequence	1.5	PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100792254), transcript variant X1, mRNA	UPF0481 protein At3g47200-like(LOC100792254)	coding protein	psRNATarget
XM_003546011.3	ncRNA:22   UCGAGG-AAAGAAGUAAAAAGAA   1   =*||||-|||||||||||||||| targets:497   GUCUCCAUUUCUUCAUUUUUCUU   519 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100792762 (LOC100792762), mRNA	uncharacterized LOC100792762(LOC100792762)	coding protein	psRNATarget
XM_014763891.1	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   *||||=|||||||||||||=|| targets:286   UGCUCUUUUCUUCAUUUUUUUU   307 Target Full Sequence	2.5	PREDICTED: Glycine max kinesin-like protein NACK2 (LOC100802226), transcript variant X3, mRNA	kinesin-like protein NACK2(LOC100802226)	coding protein	psRNATarget
XM_003538825.3	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   *||||=|||||||||||||=|| targets:286   UGCUCUUUUCUUCAUUUUUUUU   307 Target Full Sequence	2.5	PREDICTED: Glycine max kinesin-like protein NACK2 (LOC100802226), transcript variant X2, mRNA	kinesin-like protein NACK2(LOC100802226)	coding protein	psRNATarget
XM_003516502.3	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   *||||=|||||||||||||=|| targets:7   UGCUCUUUUCUUCAUUUUUUUU   28 Target Full Sequence	2.5	PREDICTED: Glycine max kinesin-like protein NACK2 (LOC100809766), transcript variant X3, mRNA	kinesin-like protein NACK2(LOC100809766)	coding protein	psRNATarget
BT091694.1	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   |*=|=|||||||=||||||||| targets:223   ACUUUCUUUCUUUAUUUUUCUU   244 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-8H21 unknown mRNA	NA	coding protein	psRNATarget
XM_014765755.1	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **=||=|||=|||||||||||| targets:154   UUUUCUUUUUUUCAUUUUUCUU   175 Target Full Sequence	2.5	PREDICTED: Glycine max sterol 3-beta-glucosyltransferase UGT80B1-like (LOC100797391), transcript variant X5, mRNA	sterol 3-beta-glucosyltransferase UGT80B1-like(LOC100797391)	coding protein	psRNATarget
XM_014765758.1	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **=||=|||=|||||||||||| targets:169   UUUUCUUUUUUUCAUUUUUCUU   190 Target Full Sequence	2.5	PREDICTED: Glycine max sterol 3-beta-glucosyltransferase UGT80B1-like (LOC100797391), transcript variant X6, mRNA	sterol 3-beta-glucosyltransferase UGT80B1-like(LOC100797391)	coding protein	psRNATarget
XM_014765743.1	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **=||=|||=|||||||||||| targets:162   UUUUCUUUUUUUCAUUUUUCUU   183 Target Full Sequence	2.5	PREDICTED: Glycine max sterol 3-beta-glucosyltransferase UGT80B1-like (LOC100797391), transcript variant X2, mRNA	sterol 3-beta-glucosyltransferase UGT80B1-like(LOC100797391)	coding protein	psRNATarget
XM_006574728.2	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **=||=|||=|||||||||||| targets:161   UUUUCUUUUUUUCAUUUUUCUU   182 Target Full Sequence	2.5	PREDICTED: Glycine max sterol 3-beta-glucosyltransferase UGT80B1-like (LOC100797391), transcript variant X1, mRNA	sterol 3-beta-glucosyltransferase UGT80B1-like(LOC100797391)	coding protein	psRNATarget
XM_006574729.2	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **=||=|||=|||||||||||| targets:161   UUUUCUUUUUUUCAUUUUUCUU   182 Target Full Sequence	2.5	PREDICTED: Glycine max sterol 3-beta-glucosyltransferase UGT80B1-like (LOC100797391), transcript variant X3, mRNA	sterol 3-beta-glucosyltransferase UGT80B1-like(LOC100797391)	coding protein	psRNATarget
XM_006574730.2	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **=||=|||=|||||||||||| targets:162   UUUUCUUUUUUUCAUUUUUCUU   183 Target Full Sequence	2.5	PREDICTED: Glycine max sterol 3-beta-glucosyltransferase UGT80B1-like (LOC100797391), transcript variant X4, mRNA	sterol 3-beta-glucosyltransferase UGT80B1-like(LOC100797391)	coding protein	psRNATarget
XM_006574733.2	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **=||=|||=|||||||||||| targets:159   UUUUCUUUUUUUCAUUUUUCUU   180 Target Full Sequence	2.5	PREDICTED: Glycine max sterol 3-beta-glucosyltransferase UGT80B1-like (LOC100797391), transcript variant X7, mRNA	sterol 3-beta-glucosyltransferase UGT80B1-like(LOC100797391)	coding protein	psRNATarget
XM_014765760.1	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **=||=|||=|||||||||||| targets:159   UUUUCUUUUUUUCAUUUUUCUU   180 Target Full Sequence	2.5	PREDICTED: Glycine max sterol 3-beta-glucosyltransferase UGT80B1-like (LOC100797391), transcript variant X8, mRNA	sterol 3-beta-glucosyltransferase UGT80B1-like(LOC100797391)	coding protein	psRNATarget
XM_006600273.2	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   ||*||=|||||||||||*|||| targets:512   AGAUCUUUUCUUCAUUUAUCUU   533 Target Full Sequence	2.5	PREDICTED: Glycine max sodium/hydrogen exchanger 2-like (LOC100791224), mRNA	sodium/hydrogen exchanger 2-like(LOC100791224)	coding protein	psRNATarget
XM_003538672.3	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **||=|||||||||*||||||| targets:22   CUCUUCUUUCUUCAAUUUUCUU   43 Target Full Sequence	2.5	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At1g12460 (LOC100800970), mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g12460(LOC100800970)	coding protein	psRNATarget
XM_003546317.3	ncRNA:22   UCGAGGAAAGAAGUAAAAAGAA   1   **||||*||||||||||||=|| targets:283   UUCUCCAUUCUUCAUUUUUUUU   304 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100777661 (LOC100777661), transcript variant X1, mRNA	uncharacterized LOC100777661(LOC100777661)	coding protein	psRNATarget