ncRNA ID | novel_gma_miR8167 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:4070596-4070703 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 24 |
Mature sequence(if miRNA) | 85 - UUCGUAUGGUUCAUACGGAUUGUU - 108 |
Stem-loop(if miRNA) |
--                      U    -CC       -------C      A   C   UUCGUAUGGUUCAUACGGAUUG UAAU   UAUGAAC        AUAUGG UCG C   |||||||||||||||||||||| ||||   |||||||        |||||| ||| A   AGGCAUACCAAGUAUGCUUAAU GUUA   AUACUUG        UAUACC AGU A UU                      U    AAC       AUGUUAUU      -   A |
Stem-loop sequence | UUCGUAUGGUUCAUACGGAUUGUUAAUCCUAUGAACCAUAUGGAUCGCCAAAUGACCAUAUUUAUUGUAGUUCAUACAAAUUGUUAAUUCGUAUGAACCAUACGGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520377.2 |
|
1.5 | PREDICTED: Glycine max phospholipase A(1) DAD1, chloroplastic-like (LOC100788424), mRNA | phospholipase A(1) DAD1, chloroplastic-like(LOC100788424) | coding protein | psRNATarget |