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BaseInfo

ncRNA ID novel_gma_miR8161
Species Glycine max
Class miRNA
Genome position Chr1:39342578-39342728 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 20
Mature sequence(if miRNA) 132 - UUAAGUGAUGACGUGACAAA - 151
Stem-loop(if miRNA) --      G        A  AAC   A      -G   C  A  CA     U     G   A             A
  UUAAGU AUGACGUG CA   GGA UGUCAC  CAU AC CU  AUCAC GACAU UCA UGUUAUGUUAUUA A
  |||||| |||||||| ||   ||| ||||||  ||| || ||  ||||| ||||| ||| |||||||||||||
  AAUUUA UACUGCAC GU   CUU ACAGUG  GUA UG GG  UAGUG UUGUG AGU AUAGUGUAGUAGU A
GC      A        C  CUA   C      AA   A  C  AA     U     G   A             G
Stem-loop sequence UUAAGUGAUGACGUGACAAACGGAAUGUCACGCAUCACACUCAAUCACUGACAUGUCAAUGUUAUGUUAUUAAAAGUGAUGAUGUGAUAAUGAGGUGUUUGUGAUAAGGCGUAAUGAAGUGACACUUCAUCUGCCACGUCAUAAUUUAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:20   AAACAGUGCAGUAGUGAAUU   1
  |||*||||||||||||||||
targets:764   UUUAUCACGUCAUCACUUAA   783

1.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget
XM_003553291.3
ncRNA:20   AAACAGUGCAGUAGU-GAAUU   1
  *||||||||||||||-|||||
targets:529   AUUGUCACGUCAUCAUCUUAA   549

3.0 PREDICTED: Glycine max mavicyanin-like (LOC100780078), mRNA mavicyanin-like(LOC100780078) coding protein psRNATarget