ncRNA ID | novel_gma_miR8161 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:39342578-39342728 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 20 |
Mature sequence(if miRNA) | 132 - UUAAGUGAUGACGUGACAAA - 151 |
Stem-loop(if miRNA) |
--      G        A  AAC   A      -G   C  A  CA     U     G   A             A   UUAAGU AUGACGUG CA   GGA UGUCAC  CAU AC CU  AUCAC GACAU UCA UGUUAUGUUAUUA A   |||||| |||||||| ||   ||| ||||||  ||| || ||  ||||| ||||| ||| |||||||||||||   AAUUUA UACUGCAC GU   CUU ACAGUG  GUA UG GG  UAGUG UUGUG AGU AUAGUGUAGUAGU A GC      A        C  CUA   C      AA   A  C  AA     U     G   A             G |
Stem-loop sequence | UUAAGUGAUGACGUGACAAACGGAAUGUCACGCAUCACACUCAAUCACUGACAUGUCAAUGUUAUGUUAUUAAAAGUGAUGAUGUGAUAAUGAGGUGUUUGUGAUAAGGCGUAAUGAAGUGACACUUCAUCUGCCACGUCAUAAUUUAACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766262.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA | uncharacterized LOC100804377(LOC100804377) | coding protein | psRNATarget | |||||||||
XM_003553291.3 |
|
3.0 | PREDICTED: Glycine max mavicyanin-like (LOC100780078), mRNA | mavicyanin-like(LOC100780078) | coding protein | psRNATarget |