ncRNA ID | novel_gma_miR8158 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:16991840-16991969 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CAAAAACCGAUGUUAAUAAACUC - 23 |
Stem-loop(if miRNA) |
--U    G       A           ----           U  -A            A      U    UUUA UAACAUC GUUUUUGGUAA    AACCGAUGUUA CA  AGUUGGUUAACA UGGUUU U    |||| ||||||| |||||||||||    ||||||||||| ||  |||||||||||| |||||| U    AAAU AUUGUAG CAAAAACCAUU    UUGGCUACAAU GU  UCAACCAAUUGU ACCAAA A CUC    A       C           CAUU           U  AC            A      A |
Stem-loop sequence | UUUUAGUAACAUCAGUUUUUGGUAAAACCGAUGUUAUCAAAGUUGGUUAACAAUGGUUUUUUAAAAACCAAUGUUAACCAACUCAUGUUAACAUCGGUUUUACUUACCAAAAACCGAUGUUAAUAAACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006601416.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC102666752 (LOC102666752), transcript variant X1, mRNA | uncharacterized LOC102666752(LOC102666752) | coding protein | psRNATarget | |||||||||
BT092789.1 |
|
2.5 | Soybean clone JCVI-FLGm-11B18 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_014775384.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100527899 (LOC100527899), transcript variant X3, mRNA | uncharacterized LOC100527899(LOC100527899) | coding protein | psRNATarget |