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BaseInfo

ncRNA ID novel_gma_miR8158
Species Glycine max
Class miRNA
Genome position Chr14:16991840-16991969 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 23
Mature sequence(if miRNA) 1 - CAAAAACCGAUGUUAAUAAACUC - 23
Stem-loop(if miRNA) --U    G       A           ----           U  -A            A      U
   UUUA UAACAUC GUUUUUGGUAA    AACCGAUGUUA CA  AGUUGGUUAACA UGGUUU U
   |||| ||||||| |||||||||||    ||||||||||| ||  |||||||||||| |||||| U
   AAAU AUUGUAG CAAAAACCAUU    UUGGCUACAAU GU  UCAACCAAUUGU ACCAAA A
CUC    A       C           CAUU           U  AC            A      A
Stem-loop sequence UUUUAGUAACAUCAGUUUUUGGUAAAACCGAUGUUAUCAAAGUUGGUUAACAAUGGUUUUUUAAAAACCAAUGUUAACCAACUCAUGUUAACAUCGGUUUUACUUACCAAAAACCGAUGUUAAUAAACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006601416.2
ncRNA:23   CUCAAAUAAUUGUAGCCAAAAAC   1
  *|||||||*|||||||||||||*
targets:418   AAGUUUAUCAACAUCGGUUUUUU   440

2.0 PREDICTED: Glycine max uncharacterized LOC102666752 (LOC102666752), transcript variant X1, mRNA uncharacterized LOC102666752(LOC102666752) coding protein psRNATarget
BT092789.1
ncRNA:23   CUCAAAUAAUUGUAGCCAAAAAC   1
  *||||*||||||||=||||||||
targets:51   AAGUUAAUUAACAUUGGUUUUUG   73

2.5 Soybean clone JCVI-FLGm-11B18 unknown mRNA NA coding protein psRNATarget
XM_014775384.1
ncRNA:23   CUCAAAUAAUUGUAGCCAAAAAC   1
  *||||*||||||||=||||||||
targets:35   AAGUUAAUUAACAUUGGUUUUUG   57

2.5 PREDICTED: Glycine max uncharacterized LOC100527899 (LOC100527899), transcript variant X3, mRNA uncharacterized LOC100527899(LOC100527899) coding protein psRNATarget