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BaseInfo

ncRNA ID novel_gma_miR8143
Species Glycine max
Class miRNA
Genome position Chr14:42266354-42266415 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 22
Mature sequence(if miRNA) 1 - CAACGGACACCGCGUCGCACCG - 22
Stem-loop(if miRNA) --CAA     A    GU --    -----   AGU
     CGGAC CCGC  C  GCAC     CGG   C
     ||||| ||||  |  ||||     |||
     GCCUG GGCG  G  UGUG     GCC   U
ACGUA     -    UG UC    CGUAC   CAU
Stem-loop sequence CAACGGACACCGCGUCGCACCGGAGUCUUACCCGCAUGCGUGUCUGGUGCGGGUCCGAUGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771164.1
ncRNA:22   GCCACGCUGCGCCACAGGCAAC   1
  ||||||||=|||||||||||||
targets:447   CGGUGCGAUGCGGUGUCCGUUG   468

1.0 PREDICTED: Glycine max uncharacterized LOC106797173 (LOC106797173), mRNA uncharacterized LOC106797173(LOC106797173) coding protein psRNATarget
XM_014775202.1
ncRNA:22   GCCACGCUGCGCCACAGGCAAC   1
  =|||||||||=|||||||||||
targets:707   UGGUGCGACGUGGUGUCCGUUG   728

1.5 PREDICTED: Glycine max uncharacterized LOC100779906 (LOC100779906), mRNA uncharacterized LOC100779906(LOC100779906) coding protein psRNATarget