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BaseInfo

ncRNA ID novel_gma_miR8142
Species Glycine max
Class miRNA
Genome position Chr14:4546526-4546656 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 1 - UUGCUGUCUUUUUUCCAACUG - 21
Stem-loop(if miRNA) --UUGC          C  AC       G  C    - A  -U    A   UAAUA     UU   U
      UGUCUUUUUU CA  UGUUCUU UG UGUU C UG  AGUU UGU     UUUAA  UUG G
      |||||||||| ||  ||||||| || |||| | ||  |||| |||     |||||  ||| A
      ACAGAGAAAA GU  ACAGGGA AU ACAA G AC  UUAA ACG     AAAUU  AAC U
AAGAUA          A  CA       G  A    A A  UU    C   --UCA     UU   U
Stem-loop sequence UUGCUGUCUUUUUUCCAACUGUUCUUGUGCUGUUCAUGUAGUUAUGUUAAUAUUUAAUUUUGUGAUUCAAUUUUAAAACUGCACAAUUUUCAAGAAACAAUAGAGGGACAACUGAAAAAGAGACAAUAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006594346.2
ncRNA:21   GUCAACCUUUUUUCUGUCGUU   1
  |||||*|||||||||||*|||
targets:655   CAGUUAGAAAAAAGACAACAA   675

2.5 PREDICTED: Glycine max protein FRA10AC1-like (LOC100796936), transcript variant X2, mRNA protein FRA10AC1-like(LOC100796936) coding protein psRNATarget
XM_006594347.2
ncRNA:21   GUCAACCUUUUUUCUGUCGUU   1
  |||||*|||||||||||*|||
targets:655   CAGUUAGAAAAAAGACAACAA   675

2.5 PREDICTED: Glycine max protein FRA10AC1-like (LOC100796936), transcript variant X3, mRNA protein FRA10AC1-like(LOC100796936) coding protein psRNATarget
XM_003541562.3
ncRNA:21   GUCAACCUUUUUUCUGUCGUU   1
  |||||*|||||||||||*|||
targets:706   CAGUUAGAAAAAAGACAACAA   726

2.5 PREDICTED: Glycine max protein FRA10AC1-like (LOC100796936), transcript variant X1, mRNA protein FRA10AC1-like(LOC100796936) coding protein psRNATarget