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BaseInfo

ncRNA ID novel_gma_miR8131
Species Glycine max
Class miRNA
Genome position Chr13:4917032-4917222 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 1 - CACUUCGAGGUACUUUGCACC - 21
Stem-loop(if miRNA) --   C              A                  C   A   CG              A                  -      -    - A
  UGC AAGUACCUCGAAGU GUCAAACGAGGGUCGCAU CCA CAA  GAUGGUUCCCGGAC AAAUUAGGGUAUGACAAA UCGUUU AAGG C U
  ||| |||||||||||||| |||||||||||||||||| ||| |||  |||||||||||||| |||||||||||||||||| |||||| |||| |
  ACG UUCAUGGAGCUUCA CAGUUUGCUUUCAGCGUG GGU GUU  UUACCAGGGGCUUG UUUAAUCCCAUACUGUUU GGCAAA UUCC G U
CC   U              C                  C   G   UG              C                  U      A    A G
Stem-loop sequence UGCCAAGUACCUCGAAGUAGUCAAACGAGGGUCGCAUCCCAACAACGGAUGGUUCCCGGACAAAAUUAGGGUAUGACAAAUCGUUUAAGGCAUUGGACCUUAAAACGGUUUUGUCAUACCCUAAUUUCGUUCGGGGACCAUUGUUUGGUGGCGUGCGACUUUCGUUUGACCACUUCGAGGUACUUUGCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602395.2
ncRNA:21   CCACGUUUCAUGGAGCUUCAC   1
  |||||*|||||||||||||*|
targets:23   GGUGCCAAGUACCUCGAAGCG   43

2.5 PREDICTED: Glycine max uncharacterized LOC102661800 (LOC102661800), mRNA uncharacterized LOC102661800(LOC102661800) coding protein psRNATarget