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BaseInfo

ncRNA ID novel_gma_miR8127
Species Glycine max
Class miRNA
Genome position Chr3:34282446-34282517 [+]
Reference genome Glycine_max_v2.0
Source SRR1294475
Length 21
Mature sequence(if miRNA) 52 - UGUUUUGGCUGCAUUUGAACU - 72
Stem-loop(if miRNA) --        A     CU   CUAUU  UAA    A  A
  UUCAGAUG CAGUU  AAU     GC   CUCU GA C
  |||||||| |||||  |||     ||   |||| ||
  AAGUUUAC GUCGG  UUG     UG   GAGG UU U
UC        -     UU   ----U  -UA    A  U
Stem-loop sequence UUCAGAUGACAGUUCUAAUCUAUUGCUAACUCUAGAACUUUUAGGAGAUGUUGUUUUGGCUGCAUUUGAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006597530.2
ncRNA:21   UCAAGUUUACGUCGGUUUUGU   1
  **|||||*|||||||||=|||
targets:615   UCUUCAACUGCAGCCAAGACA   635

2.5 PREDICTED: Glycine max wall-associated receptor kinase-like 14 (LOC100798581), mRNA wall-associated receptor kinase-like 14(LOC100798581) coding protein psRNATarget
XM_006593459.2
ncRNA:21   UCAAGUUUACGUCGGUUUUGU   1
  **||=||||*|||||||||||
targets:1352   UCUUUAAAUACAGCCAAAACA   1372

2.5 PREDICTED: Glycine max oxysterol-binding protein-related protein 4C-like (LOC100813302), transcript variant X2, mRNA oxysterol-binding protein-related protein 4C-like(LOC100813302) coding protein psRNATarget
XM_003543346.3
ncRNA:21   UCAAGUUUACGUCGGUUUUGU   1
  **||=||||*|||||||||||
targets:1357   UCUUUAAAUACAGCCAAAACA   1377

2.5 PREDICTED: Glycine max oxysterol-binding protein-related protein 4C-like (LOC100813302), transcript variant X1, mRNA oxysterol-binding protein-related protein 4C-like(LOC100813302) coding protein psRNATarget