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BaseInfo

ncRNA ID novel_gma_miR8119
Species Glycine max
Class miRNA
Genome position Chr1:50580764-50580877 [-]
Reference genome Glycine_max_v2.0
Source SRR1294475
Length 24
Mature sequence(if miRNA) 1 - AAGGAGAAAAGAGGUCGCAGAUUC - 24
Stem-loop(if miRNA) --      --       AUA      A  A   AA  -  ------C   AAAUGAAAUAUAA
  GUUUGU  CCUCUUU   CUCCUU CC UGU  CU CA       UUC             G
  ||||||  |||||||   |||||| || |||  || ||       |||
  UAGACG  GGAGAAA   GAGGAA GG AUA  GA GU       GGU             A
CU      CU       --A      -  A   AG  A  AGUAAAA   UAGUGAUCUAAUU
Stem-loop sequence GUUUGUCCUCUUUAUACUCCUUACCAUGUAACUCACUUCAAAUGAAAUAUAAGAUUAAUCUAGUGAUUGGAAAAUGAUGAAGGAAUAAGGAAGGAGAAAAGAGGUCGCAGAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006584986.2
ncRNA:24   CUUA-GACGCUGGAGAAAAGAGGAA   1
  *|=|-||||*|||||||||||*|||
targets:1680   CAGUGCUGCUACCUCUUUUCUACUU   1704

2.5 PREDICTED: Glycine max homeobox-leucine zipper protein HDG12-like (LOC100783053), mRNA homeobox-leucine zipper protein HDG12-like(LOC100783053) coding protein psRNATarget