ncRNA ID | novel_gma_miR8119 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:50580764-50580877 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294475 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGAGAAAAGAGGUCGCAGAUUC - 24 |
Stem-loop(if miRNA) |
--      --       AUA      A  A   AA  -  ------C   AAAUGAAAUAUAA   GUUUGU  CCUCUUU   CUCCUU CC UGU  CU CA       UUC             G   ||||||  |||||||   |||||| || |||  || ||       |||   UAGACG  GGAGAAA   GAGGAA GG AUA  GA GU       GGU             A CU      CU       --A      -  A   AG  A  AGUAAAA   UAGUGAUCUAAUU |
Stem-loop sequence | GUUUGUCCUCUUUAUACUCCUUACCAUGUAACUCACUUCAAAUGAAAUAUAAGAUUAAUCUAGUGAUUGGAAAAUGAUGAAGGAAUAAGGAAGGAGAAAAGAGGUCGCAGAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006584986.2 |
|
2.5 | PREDICTED: Glycine max homeobox-leucine zipper protein HDG12-like (LOC100783053), mRNA | homeobox-leucine zipper protein HDG12-like(LOC100783053) | coding protein | psRNATarget |