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BaseInfo

ncRNA ID novel_gma_miR8112
Species Glycine max
Class miRNA
Genome position Chr13:29693842-29693913 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 52 - UUUUAAAAAUCUGAUGUUGUA - 72
Stem-loop(if miRNA) --         -     U            ----   A
  UAACAUCGG UUUUU AAAAACUGAUGU    UGU A
  ||||||||| ||||| ||||||||||||    ||| G
  GUUGUAGUC AAAAA UUUUUGACUACA    ACA U
AU         U     U            CUUU   G
Stem-loop sequence UAACAUCGGUUUUUUAAAAACUGAUGUUGUAAGUGACAUUUCACAUCAGUUUUUUAAAAAUCUGAUGUUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524114.2
ncRNA:21   AUGUUGUAGUCUAAAAAUUUU   1
  *|*|||||||||*||||||||
targets:1480   AAGAACAUCAGAAUUUUAAAA   1500

2.5 PREDICTED: Glycine max putative ABC transporter C family member 15 (LOC100780998), transcript variant X1, mRNA putative ABC transporter C family member 15(LOC100780998) coding protein psRNATarget