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BaseInfo

ncRNA ID	novel_gma_miR8111
Species	Glycine max
Class	miRNA
Genome position	Chr1:51534317-51534473 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451615
Length	25
Mature sequence(if miRNA)	1 - AAAGAUGAGAUGAACUUUUCCAUAA - 25
Stem-loop(if miRNA)	-             AC        AAACA        CUCUC   G         U    A C   -  A    AAUUU  AAAGAUGAGAUGA  UUUUCCAU     AAAAUAAG     CAU AGUUAAUUU UAGA G UCA CU AUCU     C  |||||||||||||  ||||||||     ||||||||     ||| ||||||||| |||| | ||| || ||||  UUUUUAUUUUACU  AAGAGGUA     UUUUAUUU     GUA UUAAUUAAA AUCU C AGU GA UAGA     U U             CA        AUCAA        AAAAA   A         C    A -   A  A    AAAUU
Stem-loop sequence	AAAGAUGAGAUGAACUUUUCCAUAAACAAAAAUAAGCUCUCCAUGAGUUAAUUUUUAGAAGCUCACUAAUCUAAUUUCUUUAAAAGAUAAGAUGACAUCUACAAAUUAAUUAAUGAAAAAUUUAUUUUAACUAAUGGAGAAACUCAUUUUAUUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763080.1	ncRNA:25   AAUACCUUUUCAAGUAGAGUAGAAA   1   *||||||=||||||||||||||||| targets:3680   CUAUGGAGAAGUUCAUCUCAUCUUU   3704 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:25   AAUACCUUUUCAAGUAGAGUAGAAA   1   *||||||=||||||||||||||||| targets:3785   CUAUGGAGAAGUUCAUCUCAUCUUU   3809 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:25   AAUACCUUUUCAAGUAGAGUAGAAA   1   *||||||=||||||||||||||||| targets:3916   CUAUGGAGAAGUUCAUCUCAUCUUU   3940 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:25   AAUACCUUUUCAAGUAGAGUAGAAA   1   *||||||=||||||||||||||||| targets:3928   CUAUGGAGAAGUUCAUCUCAUCUUU   3952 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:25   AAUACCUUUUCAAGUAGAGUAGAAA   1   *||||||=||||||||||||||||| targets:4017   CUAUGGAGAAGUUCAUCUCAUCUUU   4041 Target Full Sequence	1.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014770536.1	ncRNA:25   AAUAC------CUUUUCAAGUAGAGUAGAAA   1   **|||------||||||||||*||||||||| targets:189   CCAUGAUCGAAGAAAAGUUCACCUCAUCUUU   219 Target Full Sequence	1.5	PREDICTED: Glycine max protein DETOXIFICATION 41-like (LOC106796893), mRNA	protein DETOXIFICATION 41-like(LOC106796893)	coding protein	psRNATarget
XM_006594197.2	ncRNA:25   AAUACCUUUUCAAGUAGAGUAGAAA   1   ||||||||||**||||||||||||| targets:893   UUAUGGAAAAACUCAUCUCAUCUUU   917 Target Full Sequence	2.0	PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X2, mRNA	probable anion transporter 6, chloroplastic(LOC100806856)	coding protein	psRNATarget
XM_003541440.3	ncRNA:25   AAUACCUUUUCAAGUAGAGUAGAAA   1   ||||||||||**||||||||||||| targets:893   UUAUGGAAAAACUCAUCUCAUCUUU   917 Target Full Sequence	2.0	PREDICTED: Glycine max probable anion transporter 6, chloroplastic (LOC100806856), transcript variant X1, mRNA	probable anion transporter 6, chloroplastic(LOC100806856)	coding protein	psRNATarget