Search result

BaseInfo

ncRNA ID novel_gma_miR8106
Species Glycine max
Class miRNA
Genome position Chr12:12841786-12841850 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 42 - AUGCUUUAUACGGAUGAACUUCAU - 65
Stem-loop(if miRNA) -- U   A  C               A    U
  G AGU CA CUGUAUAAAGCAUAU GAUG A
  | ||| || ||||||||||||||| |||| G
  C UCA GU GGCAUAUUUCGUAUA CUAC U
UA U   A  A               C    A
Stem-loop sequence GUAGUACACCUGUAUAAAGCAUAUAGAUGUAGUACAUCCAUAUGCUUUAUACGGAUGAACUUCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006593444.2
ncRNA:24   UACUUCAAGUAGGCAUAUUUCGUA   1
  |||||||||=||=|||||||||||
targets:3654   AUGAAGUUCGUCUGUAUAAAGCAU   3677

2.5 PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841) coding protein psRNATarget