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BaseInfo

ncRNA ID novel_gma_miR8104
Species Glycine max
Class miRNA
Genome position Chr10:34015883-34015960 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 21
Mature sequence(if miRNA) 1 - UUCCGGAAGAAGGGCUCUUCU - 21
Stem-loop(if miRNA) --              C    C    AAG G    C GA
  UUCCGGAAGAAGGG UCUU UGGA   U CUUC G  A
  |||||||||||||| |||| ||||   | |||| |
  AAGGCCUUCUUCCC AGAA GCCU   G GAAG C  C
GU              A    A    ACU G    U AC
Stem-loop sequence UUCCGGAAGAAGGGCUCUUCUGGAAAGUGCUUCCGGAACCACUGAAGGGUCAUCCGAAAGAACCCUUCUUCCGGAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772428.1
ncRNA:21   UCUUCUCGGGAAGAAGGCCUU   1
  =|||||*||||||||||||||
targets:130   GGAAGAACCCUUCUUCCGGAA   150

1.0 PREDICTED: Glycine max uncharacterized LOC102661169 (LOC102661169), mRNA uncharacterized LOC102661169(LOC102661169) coding protein psRNATarget
XM_006603347.1
ncRNA:21   UCUUCUCGGGAAGAAGGCCUU   1
  =|||||*||||||||||||||
targets:81   GGAAGAACCCUUCUUCCGGAA   101

1.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102662497), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102662497) coding protein psRNATarget
XM_003529886.3
ncRNA:21   UCUUCUCGGGAAGAAGGCCUU   1
  |*|||=|||||||||||*|||
targets:386   AAAAGGGCCCUUCUUCCUGAA   406

2.5 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At2g46050, mitochondrial-like (LOC100778378), mRNA pentatricopeptide repeat-containing protein At2g46050, mitochondrial-like(LOC100778378) coding protein psRNATarget