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BaseInfo

ncRNA ID novel_gma_miR8101
Species Glycine max
Class miRNA
Genome position Chr12:9396828-9396886 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 36 - AAGCUUUAGGACUCUCCUACGAGU - 59
Stem-loop(if miRNA) --          A       A   GAUAU
  UCGUAGGAGA UCCUAAA CUU     A
  |||||||||| ||||||| |||     A
  AGCAUCCUCU AGGAUUU GAA     A
UG          C       C   AAAAA
Stem-loop sequence UCGUAGGAGAAUCCUAAAACUUGAUAUAAAAAAAAAAGCUUUAGGACUCUCCUACGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771154.1
ncRNA:24   UGAGCAUCCUCUCAGGAUUUCGAA   1
  *|||||||||||||||||||||||
targets:1919   UCUCGUAGGAGAGUCCUAAAGCUU   1942

0.0 PREDICTED: Glycine max probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (LOC100800946), transcript variant X2, mRNA probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase(LOC100800946) coding protein psRNATarget
XM_003531857.2
ncRNA:24   UGAGCAUCCUCUCAGGAUUUCGAA   1
  *|||||||||||||||||||||||
targets:1920   UCUCGUAGGAGAGUCCUAAAGCUU   1943

0.0 PREDICTED: Glycine max probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (LOC100800946), transcript variant X1, mRNA probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase(LOC100800946) coding protein psRNATarget
XM_006602933.2
ncRNA:24   UGAGCAUCCUCUCAGGAUUUCGAA   1
  *|||||||||||||||||||||||
targets:1939   UCUCGUAGGAGAGUCCUAAAGCUU   1962

0.0 PREDICTED: Glycine max probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (LOC100800946), transcript variant X3, mRNA probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase(LOC100800946) coding protein psRNATarget