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BaseInfo

ncRNA ID novel_gma_miR8097
Species Glycine max
Class miRNA
Genome position Chr12:16343721-16343881 [-]
Reference genome Glycine_max_v2.0
Source SRR1451615
Length 24
Mature sequence(if miRNA) 138 - UUGACAUCGGUUUUCUAGUAAAAU - 161
Stem-loop(if miRNA) --                   A                U       C     A     -  AAU         G       
  UUGACAUCGGUUUUCUAGU AAAUCGAUGUUAAUGU AUAUAUU ACAUC GUUUU CU   AAAACCGAU UUAAUGUA
  ||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||| ||   ||||||||| |||||||A
  AACUGUAGCCAAAAGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAG UAAAA GA   UUUUGGCUA AAUUAUAU
GC                   C                U       U     C     C  -GC         A       
Stem-loop sequence UUGACAUCGGUUUUCUAGUAAAAUCGAUGUUAAUGUUAUAUAUUCACAUCAGUUUUCUAAUAAAACCGAUGUUAAUGUAAUAUAUUAAAAUCGGUUUUCGAGCAAAAUCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAAACCGAUGUCAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765729.1
ncRNA:24   UAAAAUGAUCUUUUGGCUACAGUU   1
  |*|||=||*||||||||||||||*
targets:1720   AGUUUGCUUGAAAACCGAUGUCAU   1743

3.0 PREDICTED: Glycine max rho GTPase-activating protein 5-like (LOC100812401), mRNA rho GTPase-activating protein 5-like(LOC100812401) coding protein psRNATarget