ncRNA ID | novel_gma_miR8097 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:16343721-16343881 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451615 |
Length | 24 |
Mature sequence(if miRNA) | 138 - UUGACAUCGGUUUUCUAGUAAAAU - 161 |
Stem-loop(if miRNA) |
--                   A                U       C     A     -  AAU         G          UUGACAUCGGUUUUCUAGU AAAUCGAUGUUAAUGU AUAUAUU ACAUC GUUUU CU   AAAACCGAU UUAAUGUA   ||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||| ||   ||||||||| |||||||A   AACUGUAGCCAAAAGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAG UAAAA GA   UUUUGGCUA AAUUAUAU GC                   C                U       U     C     C  -GC         A        |
Stem-loop sequence | UUGACAUCGGUUUUCUAGUAAAAUCGAUGUUAAUGUUAUAUAUUCACAUCAGUUUUCUAAUAAAACCGAUGUUAAUGUAAUAUAUUAAAAUCGGUUUUCGAGCAAAAUCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAAACCGAUGUCAACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014765729.1 |
|
3.0 | PREDICTED: Glycine max rho GTPase-activating protein 5-like (LOC100812401), mRNA | rho GTPase-activating protein 5-like(LOC100812401) | coding protein | psRNATarget |