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BaseInfo

ncRNA ID	novel_gma_miR8088
Species	Glycine max
Class	miRNA
Genome position	Chr9:12376538-12376608 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451615
Length	21
Mature sequence(if miRNA)	1 - UUUUCUGUUGAACUAUGAUGA - 21
Stem-loop(if miRNA)	--      GUU   -    G  G UC    -     A   UUUUCU   GAA CUAU AU A  AUAU CUUUG U   ||||||   ||| |||| || |  |||| |||||   AAGAGA   CUU GAUG UA U  UAUA GAGAC A GU      AAU   C    -  G UU    C     C
Stem-loop sequence	UUUUCUGUUGAACUAUGAUGAUCAUAUCUUUGAUACCAGAGCAUAUUUUGAUGUAGCUUCUAAAGAGAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006605392.1	ncRNA:21   AGUAGUAUCAAGUUGUCUUUU   1   |=|||||=|||||*||||||| targets:1083   UUAUCAUGGUUCACCAGAAAA   1103 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized protein At4g15970-like (LOC100797097), partial mRNA	uncharacterized protein At4g15970-like(LOC100797097)	coding protein	psRNATarget
XM_003555818.3	ncRNA:21   AGUAGUAUCAAGUUGUCUUUU   1   *||*||||*|||||||||||| targets:1286   GCACCAUAAUUCAACAGAAAA   1306 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized protein At4g15970 (LOC100798868), mRNA	uncharacterized protein At4g15970(LOC100798868)	coding protein	psRNATarget
XM_003527866.3	ncRNA:21   AGUAGUAUCAAGUUGUCUUUU   1   |==|=|*|||||||||||||| targets:1209   UUGUUAGAGUUCAACAGAAAA   1229 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized WD repeat-containing protein C2A9.03-like (LOC100817036), mRNA	uncharacterized WD repeat-containing protein C2A9.03-like(LOC100817036)	coding protein	psRNATarget
XM_014774590.1	ncRNA:21   AGUAGUAUCAAGUUGUCUUUU   1   |==|=|*|||||||||||||| targets:1352   UUGUUAGAGUUCAACAGAAAA   1372 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized WD repeat-containing protein C2A9.03 (LOC100775453), transcript variant X2, mRNA	uncharacterized WD repeat-containing protein C2A9.03(LOC100775453)	coding protein	psRNATarget
XM_003522757.3	ncRNA:21   AGUAGUAUCAAGUUGUCUUUU   1   |==|=|*|||||||||||||| targets:1354   UUGUUAGAGUUCAACAGAAAA   1374 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized WD repeat-containing protein C2A9.03 (LOC100775453), transcript variant X1, mRNA	uncharacterized WD repeat-containing protein C2A9.03(LOC100775453)	coding protein	psRNATarget
AK244727.1	ncRNA:21   AGUAGUAUCAAGUUGUCUUUU   1   |==|=|*|||||||||||||| targets:2883   UUGUUAGAGUUCAACAGAAAA   2903 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-12-D11	NA	coding protein	psRNATarget