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BaseInfo

ncRNA ID novel_gma_miR8076
Species Glycine max
Class miRNA
Genome position Chr9:48443095-48443159 [+]
Reference genome Glycine_max_v2.0
Source SRR1451615;SRR1451621
Length 21
Mature sequence(if miRNA) 45 - CUAACUCUGAAAUUAUUUAUA - 65
Stem-loop(if miRNA) --            -      C   CA   UGC
  UAAAUAAUUUCA AGUUAG AAU  UAA   A
  |||||||||||| |||||| |||  |||
  AUUUAUUAAAGU UCAAUC UUA  GUU   G
AU            C      A   AA   UUU
Stem-loop sequence UAAAUAAUUUCAAGUUAGCAAUCAUAAUGCAGUUUUUGAAAUUACUAACUCUGAAAUUAUUUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001254399.1
ncRNA:21   AUAUUUAUUAAAGUCUCAAUC   1
  |||*||*=|||||||||||||
targets:1369   UAUUAAGGAUUUCAGAGUUAG   1389

3.0 Glycine max uncharacterized LOC100784326 (LOC100784326), mRNA uncharacterized LOC100784326(LOC100784326) coding protein psRNATarget
BT094054.1
ncRNA:21   AUAUUUAUUAAAGUCUCAAUC   1
  |||*||*=|||||||||||||
targets:1369   UAUUAAGGAUUUCAGAGUUAG   1389

3.0 Soybean clone JCVI-FLGm-18I11 unknown mRNA NA coding protein psRNATarget
XM_006574334.2
ncRNA:21   AUAUUUAUUAAAGUCUCAAUC   1
  |||*||*=|||||||||||||
targets:1595   UAUUAAGGAUUUCAGAGUUAG   1615

3.0 PREDICTED: Glycine max uncharacterized LOC100784326 (LOC100784326), transcript variant X1, mRNA uncharacterized LOC100784326(LOC100784326) coding protein psRNATarget
XM_014778005.1
ncRNA:21   AUAUUUAUUAAAGUCUCAAUC   1
  **|==||*|||||||||||||
targets:1198   GCUGGAUCAUUUCAGAGUUAG   1218

3.0 PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At3g47570 (LOC106794146), mRNA probable LRR receptor-like serine/threonine-protein kinase At3g47570(LOC106794146) coding protein psRNATarget