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BaseInfo

ncRNA ID	novel_gma_miR8072
Species	Glycine max
Class	miRNA
Genome position	Chr9:33772451-33772564 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451615;SRR1451621
Length	24
Mature sequence(if miRNA)	1 - CCUUGUUUUCAAUAUGUUUUCUGU - 24
Stem-loop(if miRNA)	--CC           A             -U    A        UU    A   CUACU     UUGUUUUCAAU UGUUUUCUGUUUU  AAGA UUUGUACA  GAAA CAA     U     ||||||||||| |||||||||||||  |||| ||||||||  |||| |||     AACAAAAGUUA ACAAAAGACAAAA  UUCU AAACGUGU  CUUU GUU     U GUGU           A             CU    -        -U    -   UCUUU
Stem-loop sequence	CCUUGUUUUCAAUAUGUUUUCUGUUUUUAAGAAUUUGUACAUUGAAAACAACUACUUUUUUCUUUGUUUCUUGUGCAAAUCUUUCAAAACAGAAAACAAAUUGAAAACAAUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014772170.1	ncRNA:24   UGUCUUUUGUAUAACUUUUGUUCC   1   ||||=|||=|*||||||||||||| targets:1503   ACAGGAAAUAGAUUGAAAACAAGG   1526 Target Full Sequence	2.0	PREDICTED: Glycine max F-box protein At5g03970-like (LOC100810374), transcript variant X2, mRNA	F-box protein At5g03970-like(LOC100810374)	coding protein	psRNATarget
XM_003554667.3	ncRNA:24   UGUCUUUUGUAUAACUUUUGUUCC   1   ||||=|||=|*||||||||||||| targets:1504   ACAGGAAAUAGAUUGAAAACAAGG   1527 Target Full Sequence	2.0	PREDICTED: Glycine max F-box protein At5g03970-like (LOC100810374), transcript variant X1, mRNA	F-box protein At5g03970-like(LOC100810374)	coding protein	psRNATarget
XM_006573478.2	ncRNA:24   UGUCUUUUGUAUAACUUUUGUUCC   1   =|||=|||||*||||=|||||||| targets:1597   GCAGGAAACAGAUUGGAAACAAGG   1620 Target Full Sequence	2.5	PREDICTED: Glycine max la-related protein 1C-like (LOC100803372), transcript variant X2, mRNA	la-related protein 1C-like(LOC100803372)	coding protein	psRNATarget
XM_006585623.2	ncRNA:24   UGUCUUUUGUAUAACUUUUGUUCC   1   |||-||||||||||||||||||** targets:1676   ACA-AAAACAUAUUGAAAACAAAU   1698 Target Full Sequence	2.5	PREDICTED: Glycine max organic cation/carnitine transporter 7-like (LOC100786568), mRNA	organic cation/carnitine transporter 7-like(LOC100786568)	coding protein	psRNATarget